| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1221 |
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| Symbol | clpB |
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| ID | 6872585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1213728 |
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| End bp | 1216463 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642784400 |
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| Product | chaperone protein clpB |
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| Protein accession | YP_002215073 |
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| Protein GI | 198243050 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 0.362993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGA TTGACTTAGC CACCCTGGTA AAACGGCTTG CTCCCTTCGC GAAACAGGCG
CTGGAAGCGG CGGCGTCGGA GTGTATGAGC CAGCAGGCGG CAGAAATTAC CGTCGCGCAT
GTGCTGCTAC AGATGCTGGC GACCCCGCGC AGCGACTTTC GGGTGATTGC CGAACGTGCG
GAGATCGGCG CCGATGATTT ACGCCAGGCG CTGACGGTGG AAAATTACGC CACCGCCCGT
TCATCCGACA GCTACCCGTC GTTTTCCCCG ATGCTGGTTG AATGGCTGAA AGAGGCCTGG
CTGCTGGCCT CCGCGGAAAT GCAGCAGACC GAACTGCGCG GCGGCGTGCT GCTGCTCGCC
CTGCTGCATT CGCCGTTGCG CTACCTGCCG CCCGCCGCCG CCCGGTTGCT GACCGCCATC
AACCGCGACC TGCTCCGGCA GGATTTTGCC GGGTGGACGA AGGAGTCCGC CGAATCGGTG
ATCCTGAATG CGGACGGACA GACCGCCAGC GCCATAGCCG ATACCGGCGA CACCCTGCTG
GCCCGCTATG CCAAAAACAT GACCGACGAT GCCCGGCAGG GGCGGCTTGA TCCGGTGCTG
TGCCGCGATA ACGAAATTGA CCTGATGATC GATATCCTCT GCCGCCGCCG TAAAAATAAT
CCGGTGGTGG TGGGCGAAGC GGGCGTGGGC AAAAGCGCGC TGATTGAAGG GCTGGCGCTG
CGCATTATTG CCGGTCAGGT GCCGGACAAA CTGCGCGATA CCGATATTAT GACGCTGGAT
CTCGGCGCAT TACAGGCGGG CGCGTCGGTG AAAGGTGAAT TTGAGAAGCG CTTTAAGGGG
CTGATGGCGG AAGTCATTCA GTCGCCGAAA CCCGTCATCC TGTTTATCGA CGAAGCCCAC
ACGCTGATTG GCGCGGGCAA CCAGCAGGGC GGGCTGGATA TCTCCAACCT GCTCAAACCG
GCACTGGCGC GCGGCGAGCT GAAAACCATC GCCGCCACCA CCTGGAGCGA ATACAAAAAA
TACTTCGAGA AAGACTCCGC CCTGTCGCGC CGTTTCCAGT TAGTGAAAGT CAGCGAACCC
AATGCTGCCG AAGCCACCAT TATTCTGCGC GGCCTGTCGG CGGTGTATGA GCAGTCCCAC
GGCGTGCTGA TTGACGATGA AGCCTTACAG GCCGCTGCGA CGTTGAGCGA GCGCTACCTG
TCAGGCCGCC AGTTGCCGGA TAAGGCCATT GATGTGCTGG ATACCGCCTG CGCCCGCGTG
GCGATTAACC TCTCCTCGCC GCCGAGACAA ATCTCGGCGC TGACCACCCT GCGCCAGCAG
TGTGAAGCGG AAATCCGCCA GCTTGAGCGT GAGATCCGTA TTGGCCTGCG GTCGGACACC
TCACGGCTAA ACGAGGTTCT GGCGCAGTAT GACGAAACGC TGAGCGAACT GGATGCGCTG
GAGGCCGCGT GGCGCCAGCA GCAGACGCTG GTGCAGGAGA TTATCGCGCT GCGTAAGGGG
CTGCTGGACG AAACGGACGC TACCGGCAAC GACGAAACCG CAACGCCTGA AACAGAGGCG
GTGGGCAGTG ACGATGAATC CGTCACAGCG CCGCCGGAAG CGGAACCGGA AATTTCGCCA
GCCGCCCGCC TCGCGCAGCT CACCGCCGAA CTGGACGCCC TGCACCACAC GCAGCTGCTG
GTCTCCCCAC ACGTCGATAA AAAACAGATA GCCAGCGTGA TTACCGAATG GACCGGCGTG
CCGCTTAACC GCCTGTCACA AAACGAAATG TCGGTCATCA CCGACCTGCC GCAGTGGCTG
GGCGACACCA TTAAAGGCCA GGCGCTGGCG ATTAAGCACC TGCACAAACA CCTGCTGACC
GCCCGCGCCG ATCTGCGCCG TCCGGGACGC CCGCTCGGCG CGTTCCTGCT GGCCGGTCCC
AGCGGTGTCG GCAAAACCGA AACCGTGCTG CAACTGGCCG AACTGCTCTA CGGCGGTCGC
CAGTACCTGA CCACCATCAA TATGTCGGAG TTTCAGGAGA AACACACCGT TTCACGCCTG
ATTGGTTCGC CGCCGGGCTA TGTCGGCTAC GGCGAGGGCG GCGTGCTGAC CGAAGCGATT
CGTCAGAAAC CGTACTCCGT GGTGCTGCTC GACGAGGTGG AGAAAGCCCA CCCGGACGTG
CTCAACCTGT TCTACCAGGC GTTCGACAAG GGCGAGATGG CCGATGGCGA AGGGCGTCTT
ATCGACTGTA AAAATGTGGT GTTCTTCCTC ACCTCCAACC TCGGCTATCA GGTGATTGTC
GAACATGCCG ACAACCCGGA AGCCATGCAG GAAGCGCTGT ACCCGGTACT GGCGGACTTC
TTTAAACCGG CGCTGCTGGC GCGTATGGAA GTGGTGCCGT ACCTGCCGTT ATCCAGAGAA
ACGCTTGCCG TCATTATCGC CGGGAAGCTG GCGCGGCTGG ACAACGTACT GCGCGCCCGC
TTCGGCGCGG AGGTGGTGAT TGAGCCGGAG GTGACCGACG AAATCATGCA GCGCGTCACC
CGCGCCGAAA ACGGCGCGCG GATGCTGGAG TCGGTCATCG ACGGCGAGAT GCTGCCGCCG
CTCTCCCTGC TGCTGTTGCA GAAAATGGCG GCGAATATCG CCATTGCCCG TATCACGCTG
GGCGTGGCAA ACGGCGCGTT TACCGCGGAT GTGGAGGATG TGCCGGATGA GGATACTCAG
CCCGTAGCGG AAGCAGAGGA CGAAGCCGTT CTATGA
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| Protein sequence | MIQIDLATLV KRLAPFAKQA LEAAASECMS QQAAEITVAH VLLQMLATPR SDFRVIAERA
EIGADDLRQA LTVENYATAR SSDSYPSFSP MLVEWLKEAW LLASAEMQQT ELRGGVLLLA
LLHSPLRYLP PAAARLLTAI NRDLLRQDFA GWTKESAESV ILNADGQTAS AIADTGDTLL
ARYAKNMTDD ARQGRLDPVL CRDNEIDLMI DILCRRRKNN PVVVGEAGVG KSALIEGLAL
RIIAGQVPDK LRDTDIMTLD LGALQAGASV KGEFEKRFKG LMAEVIQSPK PVILFIDEAH
TLIGAGNQQG GLDISNLLKP ALARGELKTI AATTWSEYKK YFEKDSALSR RFQLVKVSEP
NAAEATIILR GLSAVYEQSH GVLIDDEALQ AAATLSERYL SGRQLPDKAI DVLDTACARV
AINLSSPPRQ ISALTTLRQQ CEAEIRQLER EIRIGLRSDT SRLNEVLAQY DETLSELDAL
EAAWRQQQTL VQEIIALRKG LLDETDATGN DETATPETEA VGSDDESVTA PPEAEPEISP
AARLAQLTAE LDALHHTQLL VSPHVDKKQI ASVITEWTGV PLNRLSQNEM SVITDLPQWL
GDTIKGQALA IKHLHKHLLT ARADLRRPGR PLGAFLLAGP SGVGKTETVL QLAELLYGGR
QYLTTINMSE FQEKHTVSRL IGSPPGYVGY GEGGVLTEAI RQKPYSVVLL DEVEKAHPDV
LNLFYQAFDK GEMADGEGRL IDCKNVVFFL TSNLGYQVIV EHADNPEAMQ EALYPVLADF
FKPALLARME VVPYLPLSRE TLAVIIAGKL ARLDNVLRAR FGAEVVIEPE VTDEIMQRVT
RAENGARMLE SVIDGEMLPP LSLLLLQKMA ANIAIARITL GVANGAFTAD VEDVPDEDTQ
PVAEAEDEAV L
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