Gene SeD_A1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1152 
Symbol 
ID6872722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1147556 
End bp1148218 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content53% 
IMG OID642784336 
Producthypothetical protein 
Protein accessionYP_002215010 
Protein GI198242622 
COG category[S] Function unknown 
COG ID[COG3110] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG GCGCGCTAAC CACCTTCCTT GCTCTCTGTT TGCCGGTGAC TGTTTTTGCC 
ACAACGCTCC GTTTGTCTAA TGAGGTTGAT CTGCTGGTGC TGGACGGCAA AAAGGTATCC 
AGCTCTTTAT TACGCGGCGC AGAGAGCATC GAACTGGAAA ACGGGCCGCA TCAACTCGTT 
TTCCGGGTGG AAAAAACCAT CCGCCTGTCC GGTAATGAAG AGCGGCTTTA TATTTCTCCG 
CCGCTGGTGA TAAGTTTCGA TACCCAACTG ATAAGTCAGG TCAATTTCCA GCTCCCGCGG 
CTGGAAAACG AGCGCGAAGC CTCGCATTTT AACGCGGCGC CGCGTCTGGC GCTTTTGGAC 
GGCGACGCCA TGCCCATTCC GGTAAAACTC GATATTCTGG CCATTACTTC TACGGCTAAA 
GTGGTCGATT ATGAAATAGA GACCGAGCGT TATAATAAAT CGGCGAAACG CGCCTCGCTT 
CCTCAGTTCG CCACGATGAT GGCAGACGAC AGCACGTTAC TTTCCGACGT CTCAGAGCTT 
GATACCGTAC CGCCGCAATC ACAAACTCTG ACAGAACAGC GGCTGAAATA TTGGTTCCGA 
CTGGCCGACC CGCAGACACG CCATCATTTT CTGCAATGGG CGGAAAAACA GCCGCCCTCT 
TGA
 
Protein sequence
MKTGALTTFL ALCLPVTVFA TTLRLSNEVD LLVLDGKKVS SSLLRGAESI ELENGPHQLV 
FRVEKTIRLS GNEERLYISP PLVISFDTQL ISQVNFQLPR LENEREASHF NAAPRLALLD 
GDAMPIPVKL DILAITSTAK VVDYEIETER YNKSAKRASL PQFATMMADD STLLSDVSEL 
DTVPPQSQTL TEQRLKYWFR LADPQTRHHF LQWAEKQPPS