| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1070 |
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| Symbol | |
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| ID | 6871887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1073816 |
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| End bp | 1075030 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642784255 |
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| Product | diaminopropionate ammonia-lyase |
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| Protein accession | YP_002214929 |
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| Protein GI | 198242145 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01747] diaminopropionate ammonia-lyase family
[TIGR03528] diaminopropionate ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0000973165 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATGAGC TTATTAAATA CCAGTTTAAT ACACGTCGGA AAAAATATGG TACAGGAGCG
GCTTTAAGTT TGCTTAACGG AAATGTTGGG CGTGAGGTGT TAGCATTTCA TAAAAAATTA
CCCAATTATG CCGTTACGCC GTTACATAAT CTGGCGCATC TAAGCCGGCG GCTTGGACTA
GGGTCCATCC ATATTAAAGA TGAGTCCTGG CGTTTTGGTC TGAATGCTTT TAAAGGTCTG
GGCGGCTCTT ATGCTGTAGG AAAATATCTC GCTGATAAAT TGCAATGTGA TATTAACTCG
TTAAGTTTTG CTGCCCTTAA CACTCCTGAG ATTAAAGAAA AAATTAAGGA TTGTGTTTTT
GTTACCGCGA CGGATGGCAA TCATGGCCGT GGTGTGGCGT GGGCGGCGGA GCAATTAGGT
CTAAAAGCCG TCGTTTATAT GCCTAAAGGA TCATCGTTAA TCCGGGCAGA GAATATTCGC
CATCATGGAG CTGAATGCAC CATCACCGAT CTGAACTACG ATGATGCAGT GCGACTGGCC
CATAGAATGG CGCAAACAAA AGGCTGGGTG CTTTTGCAGG ATACAGCCTG GACAGGGTAT
GAAGAGATCC CAACGTGGAT TATGCAAGGC TATATGACAC TAGCGGTTGA AGCTTATGAT
CAGCTCGCAG AAACAAACAG TCCGTTGCCA ACCCACCTTA TTTTACAAGC GGGGGTGGGA
TCATTTGCTG GCAGTGTTAT GGGTTATTTT GTTGAAAAAA TGCAGGAAAG TATCCCTAAT
ATTATTGTGG TTGAGCCGCA TCAGGCCAAC TGTCTTTATC AATCCGCAGT TATGAATGAT
GGTCAACCTC ACTGCGTCAC TGGCGATATG GCGACGATAA TGGCCGGGCT TGCGTGTGGG
GAGCCGAATA TTATCAGTTG GCCTATTATT CGGGACAACA CCAGTTGTTT TATTTCCGCT
GATGATTGTC TGGCGGCTAA GGGTATGCGC ATTTCTGCCG CGCCGCGTCC AGGTACGGAT
ACGCCTTTTA TTTCCGGCGA GTCCGGAGCT ATTGGCGTAG GGTTACTTTA TGAGTTGATG
AACAATATGC ATTATCAGGA TCTTGCTAAT CGCTTACAGC TTGATGCCAA TGCTCATGTT
CTGCTTATTA GCACCGAAGG CGATACGTCC CCAGATATTT ATGAAGATAT AGTCTGGAAC
GGACGCAGTG CTTAA
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| Protein sequence | MHELIKYQFN TRRKKYGTGA ALSLLNGNVG REVLAFHKKL PNYAVTPLHN LAHLSRRLGL
GSIHIKDESW RFGLNAFKGL GGSYAVGKYL ADKLQCDINS LSFAALNTPE IKEKIKDCVF
VTATDGNHGR GVAWAAEQLG LKAVVYMPKG SSLIRAENIR HHGAECTITD LNYDDAVRLA
HRMAQTKGWV LLQDTAWTGY EEIPTWIMQG YMTLAVEAYD QLAETNSPLP THLILQAGVG
SFAGSVMGYF VEKMQESIPN IIVVEPHQAN CLYQSAVMND GQPHCVTGDM ATIMAGLACG
EPNIISWPII RDNTSCFISA DDCLAAKGMR ISAAPRPGTD TPFISGESGA IGVGLLYELM
NNMHYQDLAN RLQLDANAHV LLISTEGDTS PDIYEDIVWN GRSA
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