Gene SeD_A1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1055 
Symbol 
ID6875176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1056467 
End bp1057243 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content56% 
IMG OID642784240 
Producthypothetical protein 
Protein accessionYP_002214914 
Protein GI198245262 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.102955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTTA CGCTAAAGAA AGTGATTGGC GGTATGTTAT TGCCGCTTCC GCTGATGTTG 
CTGATCATTG GCGTCGGCCT GGCGCTGCTC TGGTTTAGCC GCTTTCAGAA GACCGGAAAA 
GTATTTATCA GCGTAGGTTG GCTGGCGCTA TTGCTATTAA GCCTGCAACC CGTCTCTGAC 
CATTTGCTGC GTCCGATAGA AAACCGCTAC CCTACCTGGC AGGGTCCGCA AAAGGTGGAA 
TATATTGTGG TTCTCGGCGG CGGCTATACC TGGAACCCGC AGTGGGCGCC GAGCTCTAAT 
TTAATTAACA ACAGCTTGCC GCGGCTGGCG GAAGGCATTC GGCTGTGGCG CGCGAATCCG 
GGAGCCAGGC TGATTTTTAC CGGCGGCATA GCAAAAACCA ATACGGTAAG CACGGCGGAA 
GTCGGTGCGC GGGTGGCGCA GTCGCTGGGC GTACCGCGTA GCGATATTAT TACGCTGGAT 
AAGCCAAAAG ATACGGAAGA AGAAGCCGCC GCCGTTAAGC AGGCCATCGG CGACGCCCCT 
TTCCTGTTGG TAACCTCCGC CTCGCATTTG CCGCGTGCGA TGATTTTCTT TCAGCATGCC 
GGGCTGAATC CGCTTCCCGC GCCGGCGAAT CAGTTGGCGA TCGATTCGCC GCTCAATCCC 
TGGGAGCGGG CAATTCCGTC CCCGGTCTGG CTGATGCACA GCGATCGCGC TGGGTATGAA 
ACATTAGGGC GACTTTGGCA ATGGCTGAAA GGCATATCAG GCAAGCCAGG GGAGTAA
 
Protein sequence
MLFTLKKVIG GMLLPLPLML LIIGVGLALL WFSRFQKTGK VFISVGWLAL LLLSLQPVSD 
HLLRPIENRY PTWQGPQKVE YIVVLGGGYT WNPQWAPSSN LINNSLPRLA EGIRLWRANP 
GARLIFTGGI AKTNTVSTAE VGARVAQSLG VPRSDIITLD KPKDTEEEAA AVKQAIGDAP 
FLLVTSASHL PRAMIFFQHA GLNPLPAPAN QLAIDSPLNP WERAIPSPVW LMHSDRAGYE 
TLGRLWQWLK GISGKPGE