| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1027 |
|---|
| Symbol | |
|---|
| ID | 6872477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 1022163 |
|---|
| End bp | 1023506 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642784212 |
|---|
| Product | recombination factor protein RarA |
|---|
| Protein accession | YP_002214886 |
|---|
| Protein GI | 198244942 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAATC TGTCGCTCGA TTTTTCTGAT AATACGTTTC AACCGCTGGC CGCGCGAATG
CGGCCGGAAA ATTTAGCGCA GTATATCGGC CAGCAGCATT TGCTGGCCGC AGGTAAGCCG
TTGCCTCGCG CTATTGAGGC CGGGCATCTG CACTCCATGA TTTTATGGGG GCCGCCAGGG
ACGGGGAAAA CCACGCTCGC TGAAGTGATC GCCCGCTACG CCAGCGCCGA TGTCGAGCGT
ATTTCCGCCG TCACTTCTGG GGTAAAAGAG ATTCGTGAAG CTATCGAGCG CGCCCGCCAG
AATCGTAATG CTGGTCGCCG TACCATCCTG TTTGTCGATG AAGTGCATCG CTTTAACAAA
AGCCAGCAGG ACGCCTTTTT ACCGCATATC GAAGATGGCA CTATCACCTT TATCGGCGCG
ACCACGGAAA ATCCCTCTTT TGAGCTGAAC TCGGCGCTAT TGTCGCGAGC GCGGGTCTAT
CTGCTGAAAT CGTTGACCAC TGACGATATC GAGCAAGTAC TGGACCAGGC GATGCAGGAC
AAAACGCGTG GTTACGGCGA TCAGGATATC GTGTTACCGA ATGAGACACG GCGAGCGATT
GCTGAGCTGG TCAATGGCGA CGCGCGGCGC GCCTTAAATA CGCTGGAAAT GATGGCTGAT
ATGGCGGAGG CGGATGACAG CGGCAAACGC GTTTTATTGC CCGCCTTGTT GACCGAGATC
GCCGGCGAGC GCAGCGCGCG TTTTGATAAC AAAGGCGATC GCTTCTACGA TCTTATTTCC
GCCTTACATA AATCAGTGCG CGGCAGCGCG CCGGATGCCG CCCTCTATTG GTATGCCCGT
ATCATTACTG CGGGAGGCGA TCCGCTGTAC GTGGCGCGTC GCTGCCTGGC GATTGCCTCG
GAAGATGTGG GTAATGCCGA TCCGCGCGCG ATGCAGGTCG CCATTGCCGC GTGGGATTGT
TTCACCCGCG TTGGCCCGGC TGAAGGCGAA AGGGCGATCG CGCAGGCTAT CGTTTATCTC
GCCTGCGCAC CGAAGAGCAA CGCCGTCTAT ACCGCCTTTA AGGCTGCGCT GGCCGACGCG
CGCGAACGTC CTGATTATGA CGTTCCTGTC CATCTGCGTA ATGCGCCAAC CAAACTGATG
AAAGAGATGG GCTATGGCCA GGAGTACCGC TATGCCCACG ATGAGCCCAA TGCCTATGCT
GCGGGTGAAG TGTACTTCCC GCCGGAAATC GCGCAAACGC GCTATTATCA TCCGACAAAT
CGTGGTCTGG AAGGCAAGAT TGGCGAAAAG CTCGCCTGGC TGGCTGAACA GGATCAAAAT
AGCCCCACAA AACGCTACCG CTAG
|
|---|
| Protein sequence | MSNLSLDFSD NTFQPLAARM RPENLAQYIG QQHLLAAGKP LPRAIEAGHL HSMILWGPPG
TGKTTLAEVI ARYASADVER ISAVTSGVKE IREAIERARQ NRNAGRRTIL FVDEVHRFNK
SQQDAFLPHI EDGTITFIGA TTENPSFELN SALLSRARVY LLKSLTTDDI EQVLDQAMQD
KTRGYGDQDI VLPNETRRAI AELVNGDARR ALNTLEMMAD MAEADDSGKR VLLPALLTEI
AGERSARFDN KGDRFYDLIS ALHKSVRGSA PDAALYWYAR IITAGGDPLY VARRCLAIAS
EDVGNADPRA MQVAIAAWDC FTRVGPAEGE RAIAQAIVYL ACAPKSNAVY TAFKAALADA
RERPDYDVPV HLRNAPTKLM KEMGYGQEYR YAHDEPNAYA AGEVYFPPEI AQTRYYHPTN
RGLEGKIGEK LAWLAEQDQN SPTKRYR
|
|---|
| |