Gene SeD_A0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0979 
SymbolnfsA 
ID6873821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp969917 
End bp970639 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content54% 
IMG OID642784164 
Productnitroreductase A 
Protein accessionYP_002214839 
Protein GI198245068 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.711785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCGA CCATTGAACT TCTTTGTGGC CATCGTTCTA TTCGCCATTT CACCGATGAA 
CCCGTGACTG ACGCGCAGCG AGAGGCCATT ATTGCCGCCG CGCGCAGCAC GTCCAGTTCC 
AGTTTTTTAC AGTGCAGCTC TATTATCCGT ATTACCGATC GGGCGCTGCG TGAGGCGTTA 
GTGCCCCTGA CGGGCGGGCA AAAGCATGTG GCGCAGGCCG CTGAGTTCTG GGTATTTTGC 
GCCGATTTTA ATCGTCATTT GCAGATCTGC CCTGACGCGC AGTTGGGGCT TGCCGAACAA 
CTGCTGCTCG GTGTCGTCGA TACGGCGATG ATGGGGCAAA ATGCGCTGAC GGCGGCGGAA 
TCACTGGGAT TAGGCGGCGT GTATATCGGC GGCATCCGTA ATAATATTGA ATCTGTTACC 
GAACTATTAA AATTGCCGAA GCATGTATTG CCGCTCTTTG GCCTGTGTTT GGGATGGCCT 
GCGGATAATC CGGATCTGAA ACCGCGCCTG CCTGCCGAGC TTGTGGTTCA TGAGAACCAG 
TATCAACCGC TTGATGAAAA GCTGCTGGCG CGCTATGACG AGCAGTTGGC TGAGTATTAT 
CTGACCCGCG GCAGTAATAC GCGACGCGAT ACCTGGAGCG ATCATATCCG TCGCACCCTG 
ATTAAAGAAA ATCGCCCATT TATCCTTGAA TATTTGCATA AACAGGGCTG GGCGACGCGC 
TAA
 
Protein sequence
MSPTIELLCG HRSIRHFTDE PVTDAQREAI IAAARSTSSS SFLQCSSIIR ITDRALREAL 
VPLTGGQKHV AQAAEFWVFC ADFNRHLQIC PDAQLGLAEQ LLLGVVDTAM MGQNALTAAE 
SLGLGGVYIG GIRNNIESVT ELLKLPKHVL PLFGLCLGWP ADNPDLKPRL PAELVVHENQ 
YQPLDEKLLA RYDEQLAEYY LTRGSNTRRD TWSDHIRRTL IKENRPFILE YLHKQGWATR