Gene SeD_A0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0894 
Symbol 
ID6871674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp891125 
End bp893392 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content46% 
IMG OID642784089 
Producthypothetical protein 
Protein accessionYP_002214764 
Protein GI198246208 
COG category[S] Function unknown 
COG ID[COG4886] Leucine-rich repeat (LRR) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAATA TTACTAATAT ACAATCTACG GCAAGGCATC AAAGTATTAG CAATGAGGCC 
TCAACAGAGG TGCCTTTAAA AGAAGAGATA TGGAATAAAA TAAGTGCCTT TTTCTCTTCA
GAACATCAGG TTGAAGCACA AAGCTGCATC GCTTATCTTT GTCATCCACC TGAAACCGCC
TCGCCAGAAG AGATCAAAAG CAAGTTTGAA TGTTTAAGGA TGTTAGCTTT CCCGGCGTAT
GCGGATAATA TTCAGTATAG TAGAGGAGGG GCAGACCAAT ACTGTATTTT GAGTGAAAAT
AGTCAGGAAA TTCTGTCTAT AGTTTTTAAT ACAGAGGGCT ATACCGTTGA GGGAGGGGGA
AAGTCAGTCA CCTATACCCG TGTGACAGAA AGCGAGCAGG CGAGTAGCGC TTCCGGCTCC
AAAGATGCTG TGAATTATGA GTTAATCTGG TCTGAGTGGG TAAAAGAGGC GCCAGCGAAA
GAGGCAGCAA ATCGTGAAGA AGCCGTACAA CGGATGCGTG ACTGCCTGAA AAATAATAAG
ACGGAACTTC GTCTGAAAAT ATTAGGACTT ACCACTATAC CTGCCTATAT TCCTGAGCAG
ATAACTACTC TGATACTCGA TAACAATGAA CTGAAAAGTT TGCCGGAAAA TTTACAGGGA
AATATAAAGA CCCTGTATGC CAACAGTAAT CAGCTAACCA GTATCCCTGC CACGTTACCG
GATACCATAC AGGAAATGGA GCTGAGCATT AACCGTATTA CTGAATTGCC GGAACGTTTG
CCTTCAGCGC TTCAATCGCT GGATCTTTTC CATAATAAAA TTAGTTGCTT ACCTGAAAAT
CTACCTGAGG AACTTCGGTA CCTGAGCGTT TATGATAACA GCATAAGGAC ACTGCCAGCA
CATCTTCCGT CAGGGATTAC CCATTTGAAT GTGCAGAGTA ATTCGTTAAC CGCTTTGCCT
GAAACATTGC CGCCGGGCCT GAAGACTCTG GAGGCCGGCG AAAATGCCTT AACCAGTCTG
CCCGCATCGT TACCACCAGA ATTACAGGTC CTGGATGTAA GTAAAAATCA GATTACGGTT
CTGCCTGAAA CACTACCTCC CACGATAACA ACGCTGGATG TTTCCCGTAA CGCATTGACT
AATCTACCGG AAAACCTCCC GGCGGCATTA CAAATAATGC AGGCCTCTCG CAATAACCTG
GTCCGTCTCC CGGAGTCGTT ACCCCATTTT CGTGGTGAAG GACCTCAACC TACAAGAATA
ATCGTAGAAT ATAATCCTTT TTCAGAACGA ACAATACAGA ATATGCAGCG GCTAATGTCC
TCTGTAGATT ATCAGGGACC CCGGGTATTG TTTGCCATGG GCGACTTTTC AATTGTTCGG
GTAACTCGAC CACTGCATCA AGCTGTCCAG GGGTGGCTAA CCAATCTCGA GGAGGAAGAC
GTCAACCAAT GGCGGGCGTT TGAGACGGAA GTAAACGCGG CAGCCTTCAG CATGTTTCTG
GATCGTCTTA GCGATACGCG GAACACCCGA CACCCGGATT TTAAGGAACA AGTCTCCGCC
TGGCTAATGC GCCTGGCTGA AGATAGCGCA CTAAGAGAAA CCGCATTTAT TATAGCGATG
GGTGCAACGA TAAGCTGTGA AGATCGGGTC ACACTGGCAT ACCACCAAAT GCAGGAAGCG
ACGTTGGTTC ATGATGCTGA AAGAGGCGCC TTTGATAGCC ACTTAGCGGA ACTGATTATG
GCGGGGCGTG AAATCTTTCG GCTGGAGCAA ATAGAATCGC TCGCCAGAGA AAAGGTAAAA
CGGCTGTTTT TTATTGACGA AGTCGAAGTA TTTCTGGGTT TTCAGAATCA GTTACGAGAG
TCGCTGTCGC TGACAACAAT GACCCAGGAT ATGCGATTTT ATAACGTTTC GGGTATCACT
GAGTCTGACC TGGACGAGGC GGAAATAAGG ATAAAAATTG CTGAAAATAG GGATTTTCAC
AAATGGTTTG CGCTGTGGGG GCCGTGGCAT AAAGTGCTGG AGCGTATAGC GCCAGAAGAG
TGGCGTGAAA TGATGGCCAA AAGGGCTGAG TGTATTGAAA CGGATGAGTA TCAGAGCCGG
GTCAATGCTG AACTGGAAGC GTTAGGAATA GCAGGTGATC CTGACGCAGA GCGCATGGCT
GGAATGCGGA TAATGGAAGA GATCAATCAG ACCCTCTTTA CTGAGATCAT GGAGAATATA
TTGCTGAAAA AAGAGGTGAG CTCGCTCATG AGCGCCTACT GGCGATAG
 
Protein sequence
MFNITNIQST ARHQSISNEA STEVPLKEEI WNKISAFFSS EHQVEAQSCI AYLCHPPETA 
SPEEIKSKFE CLRMLAFPAY ADNIQYSRGG ADQYCILSEN SQEILSIVFN TEGYTVEGGG
KSVTYTRVTE SEQASSASGS KDAVNYELIW SEWVKEAPAK EAANREEAVQ RMRDCLKNNK
TELRLKILGL TTIPAYIPEQ ITTLILDNNE LKSLPENLQG NIKTLYANSN QLTSIPATLP
DTIQEMELSI NRITELPERL PSALQSLDLF HNKISCLPEN LPEELRYLSV YDNSIRTLPA
HLPSGITHLN VQSNSLTALP ETLPPGLKTL EAGENALTSL PASLPPELQV LDVSKNQITV
LPETLPPTIT TLDVSRNALT NLPENLPAAL QIMQASRNNL VRLPESLPHF RGEGPQPTRI
IVEYNPFSER TIQNMQRLMS SVDYQGPRVL FAMGDFSIVR VTRPLHQAVQ GWLTNLEEED
VNQWRAFETE VNAAAFSMFL DRLSDTRNTR HPDFKEQVSA WLMRLAEDSA LRETAFIIAM
GATISCEDRV TLAYHQMQEA TLVHDAERGA FDSHLAELIM AGREIFRLEQ IESLAREKVK
RLFFIDEVEV FLGFQNQLRE SLSLTTMTQD MRFYNVSGIT ESDLDEAEIR IKIAENRDFH
KWFALWGPWH KVLERIAPEE WREMMAKRAE CIETDEYQSR VNAELEALGI AGDPDAERMA
GMRIMEEINQ TLFTEIMENI LLKKEVSSLM SAYWR