Gene SeD_A0664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0664 
Symbol 
ID6871198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp664252 
End bp665106 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content58% 
IMG OID642783878 
ProductAraC family transcriptional regulator 
Protein accessionYP_002214564 
Protein GI198244555 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCGC TTAGTCGGCT ATTGACGCTT AACGCCCCTC AGGGCTCAAT CGACAAGAAT 
TGCCCGTTAG GCGGCGACTG GCAGTTGCCG CACGCCGCTG GCGAGCTATC GGTGATTCGC
TGGCATACCG TTACGCAGGG CGAAGCGCAA CTGGAAATGC CTACCGGCGA CGCCATGACG
CTTACGCCGG GAAAGGTGGT GATTCTGCCG CAAAACTCCG CCCACCGTTT GCGCCAGTCT
GGCGAATCAC CGACACATAT CGTCTGCGGT AGTCTACGTC TGCACACGAC GTCACGTTAT
TTCCTTACCG CGTTGCCGGA AGTGTTATGT CTTGCCCCGC CGCCGCATAG CCCCGCCAGT
ATCTGGATTA ACGCCGCCAT TTTGCTGTTA CAGCAGGAGT CAGAACGCCA TTTACCTGGC
GCTGATGTCT TATACAGTCA GCAGTGCGCC ACGCTGTTTA CCCTCGCCGT TCGCGACTGG
CTATCGCAGG CTGGCACGGC GAAAAGCGTG CTCAATTTAT TACTGCATCC CCGGCTGGGC
CGCGTGATCC TTCACATGCT GGAAACACCG GCGCATCCCT GGACGGTCGA AACGCTGGCG
CAACGGGTAC ACATGTCGCG GGCGAGCTTC GCCCAGCTAT TTCGCGACGT GTCCGCTACA
ACGCCCTTAG CCGTGTTAAC AACGCTGCGC CTGCAAATCG CCGCCCAGAC CCTGTCGCGT
GAAGTGCTGC CGGTGATGGT GATTGCCGAG TCGGTAGGTT ATGCGAGCGA ATCTTCTTTT
CACAAAGCTT TTGTCCGTGA ATTCGGTTGT ACACCAGGCG AGTACCGCAA ACGGGTCAGC
GCGCTCGGAC GATAA
 
Protein sequence
MDALSRLLTL NAPQGSIDKN CPLGGDWQLP HAAGELSVIR WHTVTQGEAQ LEMPTGDAMT 
LTPGKVVILP QNSAHRLRQS GESPTHIVCG SLRLHTTSRY FLTALPEVLC LAPPPHSPAS
IWINAAILLL QQESERHLPG ADVLYSQQCA TLFTLAVRDW LSQAGTAKSV LNLLLHPRLG
RVILHMLETP AHPWTVETLA QRVHMSRASF AQLFRDVSAT TPLAVLTTLR LQIAAQTLSR
EVLPVMVIAE SVGYASESSF HKAFVREFGC TPGEYRKRVS ALGR