Gene SeD_A0586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0586 
Symbol 
ID6871123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp603983 
End bp604807 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content52% 
IMG OID642783806 
Productputative outer membrane protein 
Protein accessionYP_002214493 
Protein GI198243695 
COG category[S] Function unknown 
COG ID[COG4727] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.630248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.168933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGT TCGCGTTTGC CCTGTGGCTC AGCGCAATCT CGCTCAACGC TTATGCAGAC 
AGTGCTAACT GTCACCAAAA AGCAAACACG CCGGAGAGCA TCGCAGCGAC AATGGATCAG 
GCGCTACAGC TCAAACAACA GCTTAACAGT CAATCCGATC CGGTCGTCAT TCTGGTTCGC 
CAGGGGCAAG ATATGTCGAG CCGACATTTA ACCTGGTCAC ATGCTGGCTA TGCCATGCGC 
CAGCCAAACG GAGACTGGCG GGTTTACCAT AATCTGAATA CTTGCGGAAC CGCTGAATCA 
GCGCTCTATA TACAAGGTCT GTATGAGTTT CTGGCTGATG ACCTGGTGAA TCAGAGCATT 
GCCGTTTTGC GCCCGCGTTC AGATATCGCG ACGGCATTAC AAACGCTCTT ACATAGCGCT 
ATCAAACTCA ATCTCTTCCA CAGTCCCCGC TATAACCTAA TTGCGTGGCC TTTTTCCGGC 
CCTTATCAGA ATTCGAATGG CTGGCTTCTC GAAGTGTTTG CGCGAGCAAA CGATGCGCAG 
GTTTGGTCAC GTAATGATGC CCGCCGCTGG TTGCAGCTTC AGGGTTATCA ACCCTCTATC 
GTTAGTGCTG GCACTTTTGA ACGATTAGGC GCAAAACTGT TCACCCCTAA CGTTTTCACC 
GACGATCAGC CAGCAGAATT GCTGCGAAAA GGAAATGTGG GGCTAAACAG CGGCGACAGC 
GTCATCCGCT TTATTGCCCA TTACAGCCGG GCAATGCCCG GGTGTGAACA TCAGAATCTG 
GGGGAGTCGG TGTGTGTTTA TCTTTCGCCC GGCGCGAAAA AATAA
 
Protein sequence
MKRFAFALWL SAISLNAYAD SANCHQKANT PESIAATMDQ ALQLKQQLNS QSDPVVILVR 
QGQDMSSRHL TWSHAGYAMR QPNGDWRVYH NLNTCGTAES ALYIQGLYEF LADDLVNQSI 
AVLRPRSDIA TALQTLLHSA IKLNLFHSPR YNLIAWPFSG PYQNSNGWLL EVFARANDAQ 
VWSRNDARRW LQLQGYQPSI VSAGTFERLG AKLFTPNVFT DDQPAELLRK GNVGLNSGDS 
VIRFIAHYSR AMPGCEHQNL GESVCVYLSP GAKK