Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0570 |
Symbol | |
ID | 6872447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 585858 |
End bp | 587312 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642783790 |
Product | allantoin permease |
Protein accession | YP_002214477 |
Protein GI | 198243659 |
COG category | [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.635464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.884181 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACATC AAAGAGAGCT ATACCAGCAG CGCGGTTATA GCGAAGACTT ATTACCTAAA ACAGAAACCC AACGAAACTG GAAGGCATTT AACTATTTCA CCTTATGGAT GGGATCTGTA CATAACGTGC CAAATTACGT TATGGTCGGC GGTTTTTTTA TACTGGGCCT ATCAACATTT AATATCATGT TGGCCATTAT TATCAGCGCA TTATTTATTG CGGCGGCGAT GGTAATGAAT GGCGCGGCAG GCAGCAAATA TGGCGTTCCT TTTGCTATGA TATTGCGAGG TTCTTACGGC GTCCGCGGCG CGCTATTCCC TGGATTATTG CGAGGGGGAA TCGCGGCAAT TATGTGGTTC GGCTTACAGT GTTACGCGGG ATCGCTGGCA TTTCTTATTT TGATTGGGAA GATCTGGCCA GGATTTCTGA CATTAGGCGG AGATTTCAAG CTGCTGGGTC TTTCACTGCC AGGACTAATT ACTTTTCTAA TTTTTTGGAT TATTAACGTT GGCATCGGTT TTGGCGGTGG TAAAGTATTA AATAAATTTA CCGCTATCCT CAATCCATGT ATTTACATTG TCTTTGGCGG CATGGCTATT TGGGCAATAT CGCTGGTCGG CATTGGCCCG ATTCTGGACT ATCTGCCTTC AGGCGTGCAA AAAGCAGAGC ACAGCGGCTT TCTGTTCCTG GTGGTGATTA ACGCCGTAGT CGCCGTCTGG GCAGCGCCAG CGGTGAGCGC GTCCGATTTC ACGCAAAACG CGCATTCATT TCGCGCTCAG GCATTGGGAC AAACGCTGGG GCTTATCGTA GCGTATATAT TATTCGCCGT AGCCAGCGTG TGCATTATTG CCGGAGCCAG TATTCATTAT GGTATGGATA CCTGGAACGT GCTGGATATT GTGCAGCGCT GGGACAGCCT GTTTGCTTCA TTCTTTGCGG TGTTGGTGAT TCTGATGACG ACAATTTCAA CCAACGCCAC CGGTAATATT ATACCTGCGG GGTATCAAAT TGCGGCGCTT GCCCCGACAA AGCTTAACTA TAAAAATGGC GTAATGATTG CCAGTATTAT CAGTCTACTG ATTTGTCCAT GGAAATTAAT GGAGAATCAG GACAGTATTT ATCTGTTCCT CGATATTATC GGCGGTATGC TTGGCCCGGT AATCGGCGTA ATGTTAGCTC ATTATTTTGT GGTAATGCGT GGAAAAATTA ATCTTGATGA GCTGTACACC GCCAGCGGTG ATTACAAATA TTATGATAAT GGATTTAACC TGACTGCATT TTCAGTCACC CTGGTCGCAG TTATTCTGTC ATTAGGCGGC AAGTTTATAC CATTTTTGGA GCCTTTATCC CGCGTGTCCT GGTTTGTAGG CGTAATAGTT GCGTTCGTTA CTTATGCGCT ATTGAAGAAA CGCACGGGTT TTGAAAATAC AGGAGAGAAA AAACTCGCAG GTTAA
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Protein sequence | MEHQRELYQQ RGYSEDLLPK TETQRNWKAF NYFTLWMGSV HNVPNYVMVG GFFILGLSTF NIMLAIIISA LFIAAAMVMN GAAGSKYGVP FAMILRGSYG VRGALFPGLL RGGIAAIMWF GLQCYAGSLA FLILIGKIWP GFLTLGGDFK LLGLSLPGLI TFLIFWIINV GIGFGGGKVL NKFTAILNPC IYIVFGGMAI WAISLVGIGP ILDYLPSGVQ KAEHSGFLFL VVINAVVAVW AAPAVSASDF TQNAHSFRAQ ALGQTLGLIV AYILFAVASV CIIAGASIHY GMDTWNVLDI VQRWDSLFAS FFAVLVILMT TISTNATGNI IPAGYQIAAL APTKLNYKNG VMIASIISLL ICPWKLMENQ DSIYLFLDII GGMLGPVIGV MLAHYFVVMR GKINLDELYT ASGDYKYYDN GFNLTAFSVT LVAVILSLGG KFIPFLEPLS RVSWFVGVIV AFVTYALLKK RTGFENTGEK KLAG
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