| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0369 |
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| Symbol | |
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| ID | 6872253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 384426 |
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| End bp | 386987 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642783604 |
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| Product | outer membrane fimbrial usher protein |
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| Protein accession | YP_002214291 |
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| Protein GI | 198243463 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.590935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCCA CCATTAATTT GAACCGCAAA AGCCTTGCGC TATTGATCGC CATAGTTTGC
TCAGGCTCCG CGCAGGGTGA AGAGTATTAT TTTGATCCTG CGCTACTTCA GGGGGCCACT
TACGGACAAA ATATTGCCCG TTTTAATGAA CAGCAAACGC CTTCCGGAGA CTATCTTGCC
GACGTTTACG TTAATGGCAC GCTGGTAGCC TCGAGCACTA ATATTCGATT TAATGCTGTA
AAAGAGGGTC AACAGGCTGA ACCCTGCCTG CCCTTATCGG TGATGAAAGC GGCACAGATA
AAATCACTCC CCGCGACCGA CGCTGCGACC GAGTGTCGCC CGCTCAGGGA GTGGGTGCCT
CATGCCGGCT GGCAATTTGA TAGCGCCACG CTTCGCCTGT TGCTGACGAT TCCAATGACC
GAACTTACGC ACAAACCGCG CGGTTATATC TCCCCTTCAG AGTGGGATAG CGGCGCGCTG
GCGCTGTTTT TACGCCATAA CACAAACTGG ACCCGCACCG AAAATACCGA CAGCCATTAT
CGCTACCAAT ACTTATGGAG CGGTTTAAAC ATGGGCGTTA ACCTCGGACT TTGGCAGGTC
CGTCATCAAA GTAATCTGCG CTATGCCAAT AGCAACCAGA GCGGAAGCGC CTGGCGCTAT
AATAGCGTTC GAACCTGGGT GCAAAGACCT GTCGCGTCTA TTAACAGTAT TCTGTCGCTG
GGCGATAGCT ATACGGACTC CAGCTTATTC GGCAGTCTGT CTTTTAACGG AGCTAAACTA
GTCACCGACG AGCGGATGCG CCCGCAGGGC AAACGCGGTT ATGCGCCGGA AGTTCGGGGC
GTAGCGGCCA GTAGCGCGCA CGTGGTAGTA AAACAACTGG GGAAAGTGAT TTATGAAACC
AACGTTCCGC CGGGCCCATT TTATATTGAC GATCTGTACA ACACCCGTTA TCAAGGCGAT
CTGGAGGTAG AGGTTATCGA GGCCAGCGGT AAAACCTCAC GTTTCACCGT GCCTTATTCT
TCCGTGCCGG ATTCGGTTCG CCCCGGTAAC TGGCACTATT CGCTGGCCTT CGGCAGGGTT
CGTCAGTACT ACGATATTGA AAATCGTTTC TTTGAGGGAA CGTTCCAGCA CGGCGTTAAT
AACACCATTA CCCTCAACCT CGGTTCACGA ATTGCGCAGC GTTACCAGGC ATGGCTGGCG
GGCGGCGTCT GGGCCACCGG TATGGGCGCG TTCGGCCTTA ACGCCACCTG GTCGAACGCG
CGCGCAGAGC ATAACGATCG CCAGCAAGGC TGGCGCGCGG AACTCAGTTA CAGCAAAACG
TTTACCACCG GCACTAACCT GGTACTGGCG GCTTATCGTT ATTCAACCAA CGGCTTTCGC
GATCTTCAGG ACGTGCTCGG CGTACGCCGG GAAGCAAAAA CGGGGATTGA TTACTACTCC
GACACGCTGC ATCAGCGCAA TCGCCTGTCC GCGACGGTAA GCCAGCCGTT AGGACGGCTT
GGCACGCTTA ACCTCAGCGC CAGCACCGCA GACTACTACA ATAACCAATC GCGTATAACA
CAGCTACAAA TGGGATATAG CAACCAGTGG CGGAATATAA GCTACGGGGT GAATATCGCA
CGACAGCGCA CCACCTGGGA TTACGATCGC TTTTATCACG GCGTTAACGA ACCACTGGAC
GTGAGTAGCC GACAAAAATA TACCGAAACC ACAATGTCGT TTAATGTCTC TATACCGCTG
GATTGGGGCG AAAACAGAAC GTCTGTCGCC ATGAATTATA ACCAGTCCAG TCAAAGCCGT
TCCTCAACCG TATCTATGAC CGGCAGTAGC GGTGAAAATA GCGACCTGTC ATGGTCGGTT
TATGGCGGCT ACGAGCGTTA TCGCAATAGT AATAGCGATA GCAGCGCGCC AACGACGTTT
GGCGGTAATC TACAACAGAA CACCCGGTTT GGCGCACTTC GCGCCAACTA TGACCAGGGT
GATAACTATC GTCAGGAAGG GCTGGGCGCG TCCGGCACCC TGGTACTTCA CCCTGGCGGT
CTGACGGCTG GCCCCTATAC CAGCGATACC TTTGCGCTTA TTCATGCCGA TGGCGCGCAG
GGCGCGATCG TACAAAATGG CCAGGGCGCT GTGGTTGATC GCTTTGGTTA CGCCATTCTG
CCTTCGTTAT CTCCTTACCG CGTCAATAAC GTTACGCTCG ATACCCGTAA GATGCGCAGC
GATGCCGAAC TGACGGGAGG AAGTCAGCAG ATTGTGCCCT ATGCCGGCGC CATCGCGCGT
GTCAATTTCG CCACTATCAG CGGCAAAGCG GTGCTGATCT CCGTGAAGAT GCCGGATGGC
GGCATACCGC CAATGGGCGC TGATGTTTTC AACGGTGAAG GCACAAACAT CGGCATGGTC
GGCCAGAGTG GGCAGATTTA TGCCCGTATC GCCCATCCGT CGGGTTCTCT ACTGGTGCGC
TGGGGAACAG GGGCAAACCA GCGTTGCCGG GTTGCCTACC AACTCGATCT TCACACCAAA
GAACCGTTTC TCTATCTGAA CAAAATCTGC GAGAAGGAAT AG
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| Protein sequence | MSPTINLNRK SLALLIAIVC SGSAQGEEYY FDPALLQGAT YGQNIARFNE QQTPSGDYLA
DVYVNGTLVA SSTNIRFNAV KEGQQAEPCL PLSVMKAAQI KSLPATDAAT ECRPLREWVP
HAGWQFDSAT LRLLLTIPMT ELTHKPRGYI SPSEWDSGAL ALFLRHNTNW TRTENTDSHY
RYQYLWSGLN MGVNLGLWQV RHQSNLRYAN SNQSGSAWRY NSVRTWVQRP VASINSILSL
GDSYTDSSLF GSLSFNGAKL VTDERMRPQG KRGYAPEVRG VAASSAHVVV KQLGKVIYET
NVPPGPFYID DLYNTRYQGD LEVEVIEASG KTSRFTVPYS SVPDSVRPGN WHYSLAFGRV
RQYYDIENRF FEGTFQHGVN NTITLNLGSR IAQRYQAWLA GGVWATGMGA FGLNATWSNA
RAEHNDRQQG WRAELSYSKT FTTGTNLVLA AYRYSTNGFR DLQDVLGVRR EAKTGIDYYS
DTLHQRNRLS ATVSQPLGRL GTLNLSASTA DYYNNQSRIT QLQMGYSNQW RNISYGVNIA
RQRTTWDYDR FYHGVNEPLD VSSRQKYTET TMSFNVSIPL DWGENRTSVA MNYNQSSQSR
SSTVSMTGSS GENSDLSWSV YGGYERYRNS NSDSSAPTTF GGNLQQNTRF GALRANYDQG
DNYRQEGLGA SGTLVLHPGG LTAGPYTSDT FALIHADGAQ GAIVQNGQGA VVDRFGYAIL
PSLSPYRVNN VTLDTRKMRS DAELTGGSQQ IVPYAGAIAR VNFATISGKA VLISVKMPDG
GIPPMGADVF NGEGTNIGMV GQSGQIYARI AHPSGSLLVR WGTGANQRCR VAYQLDLHTK
EPFLYLNKIC EKE
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