Gene SeD_A0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0344 
Symbol 
ID6874909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp362638 
End bp363777 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content57% 
IMG OID642783581 
Producthypothetical protein 
Protein accessionYP_002214269 
Protein GI198244285 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03073] release factor H-coupled RctB family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.119955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.8307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAATT ATATTCGTCC TTTATCAGAT GTGGTATTTT CTATCGCATC GGATAACCTG 
TGGATCGAAG ATTCCGCGAT CCAACAATTA TATACGACGG CTAAGTTAAC CGGTATGAAA
CGCGTTATCG GGATGCCAGA TCTGCATCCG GGGCGCGGCT ATCCTATTGG CGCAGCCTTT
TTCTCGCGTG GACGTTTTTA TCCGGCGCTG GTCGGCAACG ATATCGGCTG CGGCATGGCG
TTATGGCAAA CGGATATTTT AGGGCGTAAA TATAACGCCG ATAAACTGGA GAAGCGGCTG
GCGTCGCTGC CTGACGTGGC GGACGCGCAG TGGCTGGAGG AGAATGTCCC CGCCGCAATG
CAGCATCATT CGTGGCGCTC TGCGCTGGGT TCCATTGGCG GCGGCAATCA TTTTGCCGAG
CTGCAGCAGG TCGATCGCAT CGTCGATGCT GATTCGTTCG CTTTGTCGGG GTTGCAAAAA
GCGCAGTTAT TACTGCTGGT ACACAGTGGT TCACGCGGTC TGGGGCAAGC TATCCTGCGT
CGTCATGTGG CGGCGTTTTC GCATAACGGT TTGCCGGAAG ATAGCGACGA TGCGCGCCAC
TACCTTGCAG AACATGACGA TGCGCTGGCA TTTGCCCGCA GTAATCGCGC GCTGATTGCC
CGCCGGATAC TGCAACAGCT CAGGGCTGAG GGCGAACCGC GGCTGGATGT GGCGCATAAC
TTCGTTGAAC CCTGTACTGT CGCGGGTGAG GCGGGGTGGC TGCACCGTAA AGGCGCTACG
CCAGATGGGC AGGGACTGGT GATTATCCCC GGCTCGCGCG GCGATTATAG CTGGCTGGTG
AAACCCGTCG TCAGCGAGGA GAGCCTCTTC TCCCTGGCGC ACGGCGCGGG GCGCAAATGG
ATGCGTACCG AGTGTAAAGA ACGGTTATCG GCAAAATTTA CCCCGCGACA GCTCTGCCGT
ACTGGGATGG GTAGCCGGGT GATTTGCCGC GATCGCCAGC TCATTTATGA AGAAGCGCCG
CAGGCGTATA AATCCATCGA TAGCGTTGTG GATTGTCTGG CAGACGCCGG ACTGATTACG
CCAGTTGCCT GCCTGCGTCC GGTGCTGACG CTGAAAACCT CAGGGGAGAA AAGCGCATGA
 
Protein sequence
MGNYIRPLSD VVFSIASDNL WIEDSAIQQL YTTAKLTGMK RVIGMPDLHP GRGYPIGAAF 
FSRGRFYPAL VGNDIGCGMA LWQTDILGRK YNADKLEKRL ASLPDVADAQ WLEENVPAAM
QHHSWRSALG SIGGGNHFAE LQQVDRIVDA DSFALSGLQK AQLLLLVHSG SRGLGQAILR
RHVAAFSHNG LPEDSDDARH YLAEHDDALA FARSNRALIA RRILQQLRAE GEPRLDVAHN
FVEPCTVAGE AGWLHRKGAT PDGQGLVIIP GSRGDYSWLV KPVVSEESLF SLAHGAGRKW
MRTECKERLS AKFTPRQLCR TGMGSRVICR DRQLIYEEAP QAYKSIDSVV DCLADAGLIT
PVACLRPVLT LKTSGEKSA