Gene SeD_A0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0159 
Symbol 
ID6872210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp167193 
End bp168047 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content55% 
IMG OID642783406 
Productregulatory protein AmpE 
Protein accessionYP_002214100 
Protein GI198241957 
COG category[V] Defense mechanisms 
COG ID[COG3725] Membrane protein required for beta-lactamase induction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGT TTACGACATT ACTGGTGCTG ATTGTCGAGC GCCTGTTTAA GCTGGGCGAG 
CACTGGCAGC TCGATCATCG GCTGGAGGCG CTATTCCGTC GGATTACGCA TTTTTCGATG 
TTGCGCACGA TGGGAATGAC GGCGATCGCG ATGGTGGTGA CTTTTCTACT GCTCCAGGCG 
TTAAAAGGGC TGCTATTTAA CGTGCCGACG CTGGTGGTGT GGATTCTCCT GGGCGTGCTG 
TGTATCGGCG CGGGCAAAGT GCGAGTACAT TATCACGCCT GGCTGAAAGC GGCGTCCCGT 
AACGATCCGC ATCCTTGCGA GGCGATGGCC AGCGAGCTTA CGCTGATTCA CGGCGTGCCG 
CCGGATTGTA ATGAGCGTGA GTTTTTGCGT GAGCTGCAAA ATGCGTTGTT ATGGATAAAT 
TTCCGTTTTT ACCTCGCACC GCTATTTTGG TTTATCGTTG GCGGTCCATG GGGGCCGGTA 
ACGCTGGTGG GCTATGCGTT TTTACGGGCC TGGCAGACTT GGCTGGCGCG CTATCAGACG 
CCGCACCAAC GTTTGCAATC CGGCATTGAC GCTATTCTTC ATGTGCTGGA CTGGATTCCG 
GTACGTCTGG CGGGCGTAGT GTATGCATTA CTGGGGCATG GCGAGAAAGC GTTGCCGGCC 
TGGTTTGCCT CGCTGGCGGA TCTGCATACT TCGCAGTATC AGGTGCTCAC ACGTCTGGCG 
CAGTTCTCAC TGGCGCGCGA ACCGCATACT GACAAAGTAG AAACCCCCAA AGCGGCGGTA 
TCAATGGCGA AGAAGGCCTC GTTTGTGGTG GTGGTGATTA TTGCGTTGCT CACCATTTAT 
GGGGCATTAG TGTAG
 
Protein sequence
MTLFTTLLVL IVERLFKLGE HWQLDHRLEA LFRRITHFSM LRTMGMTAIA MVVTFLLLQA 
LKGLLFNVPT LVVWILLGVL CIGAGKVRVH YHAWLKAASR NDPHPCEAMA SELTLIHGVP 
PDCNEREFLR ELQNALLWIN FRFYLAPLFW FIVGGPWGPV TLVGYAFLRA WQTWLARYQT 
PHQRLQSGID AILHVLDWIP VRLAGVVYAL LGHGEKALPA WFASLADLHT SQYQVLTRLA 
QFSLAREPHT DKVETPKAAV SMAKKASFVV VVIIALLTIY GALV