| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0044 |
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| Symbol | |
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| ID | 6872096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 48370 |
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| End bp | 50409 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642783302 |
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| Product | glycoside hydrolase, family 31 |
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| Protein accession | YP_002213996 |
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| Protein GI | 198242197 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.228548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.00512205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCATTTA TGCAACAAGA CCCGCGTCGT CTGGTCTGGC AGCAAAACGA TCGCTATTTA
TGGATTGAAC CCTGGGGCGA GAACAGCCTG CGCGTACGCA GCGGCCGTCA TCTGCCGGTA
ATGAGAAATG AAGACTGGGC ATTGACTGAG CCAGTCGCAG AAAGTCAGTG CCACATTGAT
TATGAGCACC ACCAGGCAAC GCTGACCAAC GGCAAAATTA TCGCTATCGT CAATCAAAAA
GGACAAGTTA CCTTTTACCG CCATCCACAC AAACCCCTGT TGCAGGAGTT CTGGCGCCTG
CGGGGCGAAA TTGGCGAGGA TGAATCATCT CACGGCCAGT ACGTTAGCGC ACTCAACCTT
GAGGGACGCG AGTTCCGCCC TATTCAGGGT GGGAAATATT CACTGAAAGC CCGCTTCGAA
GCCACCGAAG GGGAAAAAAT TTATGGCATG GGGCAGTATC AACAGGCCAA CCTGGATCTC
AAAGGATGCG TGCTTGAGCT GGCGCAACGT AACTCCCAGG CCTCAGTACC GTTTATGCTC
TCCAGTCTGG GCTACGGATT TTTATGGAAC AACCCGGCAG TCGGACGCGT AACCTTTGCC
CAAAACGTTA CCGAATGGGA AGCGCAGGTC AGCGAACAGT TAGACTACTG GATCACGGCT
GGCGATACCC CGGCAGAAAT TAGCCGGGCT TACGCGCTGG CTACCGGCAC GCCGCCGATG
ATGCCGGACT ACGCCATGGG CTTCTGGCAG TGCAAACTCC GTTATCGTAC GCAGGAAGAG
CTGCTGGAGG TCGCCCGCGA ATATAAGCGC CGCAATCTGC CTATCTCAGT GATCGTTATC
GACTTCTTTC ACTGGCCGAA TCAGGGTGAC TGGATGTTCG ATGCGCGCGA CTGGCCCGAT
CCTGATGCCA TGATTGCCGA GCTGAAATCG CTGGGAATTG AGCTGATGGT CTCCGTCTGG
CCGACGGTGG ATAACCGTAC CGAAAGCTAT CGGGAGATGC GCGAAAACGG CTGGCTGGTA
CAAACGGAAC GTGGCTTGCC GATCAATATG GATTTCCTCG GCAATACCAC TTACTTTGAT
GCGACTCATC CGGGCGCGCG CGACTACGTC TGGGGCAAAG CCAAACGCAA CTATTACGAT
AAAGGCGTGA AGTTATTCTG GTTAGATGAA GCCGAACCTG AGTTCAGCGT TTACGACTAC
GACAACTATC GCTACCATGC CGGGCCGGTA CTGGAAGTGG GCAATATCTA CCCACGCATG
TACGCCAAAA CCTTTTTTGA TGGCATGAAA GCCGATGGCG AAGACCAGGT TATCAACCTG
CTACGCTGCG CCTGGGCCGG CAGTCAGAAG TACGGCGCTC TGGTCTGGTC AGGGGATATT
CACTCCTCGT TTAGATCGCT GCGCAACCAG TTTGCCGCCG GACTCAATAT GGGAATAGCA
GGGATACCGT GGTGGACGAC GGATATCGGC GGTTTCCATG GCGGTAATAT TCACGACCCG
AAATTCCATG AATTGCTAAT TCGCTGGTTC CAGTGGGGCG TCTTTAGTCC GGTGATGCGT
CTGCACGGCA ACCGCGATCC GCAGATTTTA CCCGCGCAAC CGTACCGGGA TGGCATTGCT
CAATGCCCTA CAGGTGCGCC GAACGAGGTC TGGAGCTACG GTGAGGAAGT ATGCGACGTA
CTGACAGGTT GCCTGGCGTT GCGAGAAAAA CTCAAGCCCT ATATCAAAGC GCTGATGGAG
GAAACCCATA AGCACAATAC GCCAGTGATG CGCCCCCTGT TCTTTGAATT CCCCGAACAG
GAAACAAGTT GGACAATCAC CGACCAGTAT TGTTTTGGTC CTGACCTGCT GATCGCCCCC
GTCATGCATG AAGGTATGCG CGAGCGTGAT GTCTGGCTAC CAGAAGGGGA AACATGGACG
GATCTTGCGA CCGGTGAAAG CTATTCAGGA GGGCAGACGC TGCATTACGC TACGCCACTG
AACAGAATTC CGGTGTTTAT CCGCGAAGGT GGGCAGTACC GTAGCCTGCT GAACTTGTAG
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| Protein sequence | MPFMQQDPRR LVWQQNDRYL WIEPWGENSL RVRSGRHLPV MRNEDWALTE PVAESQCHID
YEHHQATLTN GKIIAIVNQK GQVTFYRHPH KPLLQEFWRL RGEIGEDESS HGQYVSALNL
EGREFRPIQG GKYSLKARFE ATEGEKIYGM GQYQQANLDL KGCVLELAQR NSQASVPFML
SSLGYGFLWN NPAVGRVTFA QNVTEWEAQV SEQLDYWITA GDTPAEISRA YALATGTPPM
MPDYAMGFWQ CKLRYRTQEE LLEVAREYKR RNLPISVIVI DFFHWPNQGD WMFDARDWPD
PDAMIAELKS LGIELMVSVW PTVDNRTESY REMRENGWLV QTERGLPINM DFLGNTTYFD
ATHPGARDYV WGKAKRNYYD KGVKLFWLDE AEPEFSVYDY DNYRYHAGPV LEVGNIYPRM
YAKTFFDGMK ADGEDQVINL LRCAWAGSQK YGALVWSGDI HSSFRSLRNQ FAAGLNMGIA
GIPWWTTDIG GFHGGNIHDP KFHELLIRWF QWGVFSPVMR LHGNRDPQIL PAQPYRDGIA
QCPTGAPNEV WSYGEEVCDV LTGCLALREK LKPYIKALME ETHKHNTPVM RPLFFEFPEQ
ETSWTITDQY CFGPDLLIAP VMHEGMRERD VWLPEGETWT DLATGESYSG GQTLHYATPL
NRIPVFIREG GQYRSLLNL
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