Gene SeD_A0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0031 
Symbol 
ID6872498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp32546 
End bp32995 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content37% 
IMG OID642783289 
Producthypothetical protein 
Protein accessionYP_002213983 
Protein GI198245062 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.119612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.0428239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAAT ATACTATTAA TAACGAATTT ATTTATAATG AGTCGTTAAG AGAAATAATA 
TCATTACATG ATAAAAAAGT GCTAAAGGTG ACGCTAATGC GTGCGCGTTG TTTAAGCTAT 
CTTTTTGAAA ATGCCTACAA GAAACTGATT ACGCGGGAGA TGATTTCACA CGCAGTTTGG 
GGAGAGCGAA GTCAATTTGT TAGCGATGCT AATTTGACGC AACTTCTTTA TCTGCTGCGA 
CGAGATTTAC AACAAATCGG GCTTTTCGAA CTGTTTGTTA CGCTCCCCAG GCAGGGGATA 
AAAATCGATG AAAGATTTAT CATTGACGCT GCTGACATAC CGCCACAAGC TATTCAATAT 
CATACTCACC GATGTAATAA AATTATATCC ATTGGTATTC CCACTCTTTT TTTATTGATC 
GTGCTTTTCT TTTTAGCGCC GTTTATCTGA
 
Protein sequence
MRQYTINNEF IYNESLREII SLHDKKVLKV TLMRARCLSY LFENAYKKLI TREMISHAVW 
GERSQFVSDA NLTQLLYLLR RDLQQIGLFE LFVTLPRQGI KIDERFIIDA ADIPPQAIQY 
HTHRCNKIIS IGIPTLFLLI VLFFLAPFI