| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B4007 |
|---|
| Symbol | |
|---|
| ID | 6793862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 3905265 |
|---|
| End bp | 3906749 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642778123 |
|---|
| Product | putative sugar |
|---|
| Protein accession | YP_002148717 |
|---|
| Protein GI | 197248817 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATT ACCACGCAGC GCTTGTCATT GACATTGGCA CAACTAACTG CAAAGTCAGC
TGTTATTCCT GTCATGACGT GTCAGTTCTG GAAGTCCGCA AGTTTCCGAC GCCAACAATA
TCGTCGGACA AAGGCGAGGT AGATTTCGAT ATCGAAGCGC TGTGGCAGGC ACTGCGACTG
GTAATGGCTG AACTGGTGGC TTCAGTACCG TTTCCGGTAA AAAATATCAG TATTGCGAGT
TTCGGTGAGT CTGGCGTCTT TGTGGATAAG GAGGGCGTCA TTCTTACCCC GATGCTGGCC
TGGTATGATC GACGTGGTGA ATCTTATCTC TCGTCATTAA GCAAGGCAGA GGCTGAAGAA
CTGTATTCTA TAACGGGATT GCCACCTCAC AGTAATTACT CAGCATTTAA AATGAGATGG
TTGCTTGATA ACTACTCCTT GCATGAAAGA AAAGATATCT GCTGGTTACA TGCTCCAGAA
GTGTTGTTGT GGCGAATGAC AGGTGCGAAA AAGACGGAAA TATCCCTGGC CAGTAGAACG
TTGTGTCTGG ACATTGCTCG CCGTACCTGG TCTCGTAATG CTGCCGGGAT TCTCGGCATA
CCGTTCGGTG TACTGGCTCC GTTGATAAAG CCGGGTGAAG TGGCCGGATG GGTGACTGCA
ACGCTCAGGC AGGAGTTGGG ATTACCACAT GAGGTAAAAG TCACCCTGGC CGGACACGAT
CATATGGTCG GTGCCCGCGC ATTACAGATG CAACCGGGCG ATGTGCTGAA TTCTACCGGC
ACGACAGAGG GTATTTTACT GCTGAATACA CAGCCAACGC TTGATGTGCA GGCTCGCAGG
GATAAGCTGG CAAATGGTTG TTACTCCGAT GGTGAATTTT TCACGCTTTT CGCTTCTCTG
CCTGTCGGCG GTTATGCGCT TGAATGGGTG AAAAAAACCT TTCGTTTAAC TGATAAGGAA
ATAAGCACAG GCCTGGAAAA AGCCATGGAG CAATACCTCA AACCTTCCTG GTCTGTCGAG
CATGTGCCGG TATTTATTCC TCATTTGCGG GGCTCGGGTT CGCCAAATAA AAATCGGCAC
ACTCGTGGCC TGCTTTTTGG TCTGACGGAT TCACTTCCTC CGGAGTCTCT GCTTGAGAGT
GTCTTTATTG GCCTGGCGAT GGAGTTTGCA CACTGTCACG GGTGCTTTAA TATCCCGGCG
GGCAGGACAG TAAAAGTCAT TGGTCCTGCG GTGAAAAACC CATACTGGCT CCAGTTGAAG
GCTGACATCC TCCAGTGTCC AATTGAGGCC ATTGCTTTTG ATGAAACCGT CTCCCTTGGA
GCATTGTTGA TAGCCTGTCC GAATGTTGTC CCCCCGACTG TTCCTGTGGC TGATCGATAT
TTTCCTGACG CGGTTCGTTC TGCAAAGTTG AAAATATATC AGCAGCAATG GCTGTCATTT
TATCAATTTA AACTGCGGCA AGAAGGGGCG CTTATTGGTG AATAA
|
|---|
| Protein sequence | MPDYHAALVI DIGTTNCKVS CYSCHDVSVL EVRKFPTPTI SSDKGEVDFD IEALWQALRL
VMAELVASVP FPVKNISIAS FGESGVFVDK EGVILTPMLA WYDRRGESYL SSLSKAEAEE
LYSITGLPPH SNYSAFKMRW LLDNYSLHER KDICWLHAPE VLLWRMTGAK KTEISLASRT
LCLDIARRTW SRNAAGILGI PFGVLAPLIK PGEVAGWVTA TLRQELGLPH EVKVTLAGHD
HMVGARALQM QPGDVLNSTG TTEGILLLNT QPTLDVQARR DKLANGCYSD GEFFTLFASL
PVGGYALEWV KKTFRLTDKE ISTGLEKAME QYLKPSWSVE HVPVFIPHLR GSGSPNKNRH
TRGLLFGLTD SLPPESLLES VFIGLAMEFA HCHGCFNIPA GRTVKVIGPA VKNPYWLQLK
ADILQCPIEA IAFDETVSLG ALLIACPNVV PPTVPVADRY FPDAVRSAKL KIYQQQWLSF
YQFKLRQEGA LIGE
|
|---|
| |