| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3284 |
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| Symbol | |
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| ID | 6792907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | + |
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| Start bp | 3193886 |
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| End bp | 3194086 |
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| Gene Length | 201 bp |
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| Protein Length | 66 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642777428 |
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| Product | hcp |
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| Protein accession | YP_002148033 |
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| Protein GI | 197250101 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.360217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCTGGGCT ATATCGACAC CTACAACAAG GCCGGATGCC AGCTATCGAC ACTTTCCGCT
GTGCCGCACT GCCAGGACAA CACCAAACGT GAGTTCACAC ATCTGGTTAG AGTTTCTCTG
GCTTACCGCA AAATTGAGTG GGAACACGTT TCAACAGGCA CTTCAGGTGC TGATGACTGG
CGTGCGCCGC TGGAAGCATA A
|
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| Protein sequence | MLGYIDTYNK AGCQLSTLSA VPHCQDNTKR EFTHLVRVSL AYRKIEWEHV STGTSGADDW
RAPLEA
|
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