| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3185 |
|---|
| Symbol | |
|---|
| ID | 6794377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 3109796 |
|---|
| End bp | 3110386 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642777336 |
|---|
| Product | probable fimbrial protein |
|---|
| Protein accession | YP_002147943 |
|---|
| Protein GI | 197247532 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAATA AAATAATACT TGCCATGGCG GCTGCCGGTA TGATGTATGG CGCTTCTGTA
TTTGCCGCCG ATACTACACC CACAACAGCA GGCCCGTTCG GCTCAGGTAA AATTCTTTTC
ACTGGTACCA TCACCAACTC ACCCTGTAAT ATCGCACCGG GCGACGATGC GATCACCGTT
CCGTTTGGAC AGATTTCTTA CCGTAAACTG AATACCGCCG ACGCAACCAC GGAATCCAAA
CCGTTCACCA TTCATCTACA GAACTGTGCA TTTGATACGG ATGATGCACA GCCCAATCCG
AACCCGGTTG GGAAAATGTC CAAAGTGACC GTCTCTTTCT CTGGCGGAGC CGATGTAGCG
AAAAAGGCTT ACACCACCAA CGGCGCAGCC AAACATGTTG GTGTCCAGTT ACTGAAGAGT
GACAACACCA CAATTATCGA GCCCAACACC CCGATGCCGG ATGGCGACGC TCAACAACTG
CAGGCCGGAA ACAACGAACT CAACTTCTTT GCCCGGCTAA TAGCACTGGA TAATGGCGTC
ACTCCCGGTG ACTTCAACGC CTCCGTCACC TACACCCTGA AATACCTGTG A
|
|---|
| Protein sequence | MRNKIILAMA AAGMMYGASV FAADTTPTTA GPFGSGKILF TGTITNSPCN IAPGDDAITV
PFGQISYRKL NTADATTESK PFTIHLQNCA FDTDDAQPNP NPVGKMSKVT VSFSGGADVA
KKAYTTNGAA KHVGVQLLKS DNTTIIEPNT PMPDGDAQQL QAGNNELNFF ARLIALDNGV
TPGDFNASVT YTLKYL
|
|---|
| |