| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2906 |
|---|
| Symbol | gabP |
|---|
| ID | 6794822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 2851471 |
|---|
| End bp | 2852871 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642777075 |
|---|
| Product | gamma-aminobutyrate transporter |
|---|
| Protein accession | YP_002147689 |
|---|
| Protein GI | 197249468 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
|---|
| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCAAT TGTCAGAATC ACATGCATTA GGGGGCGGGC TGAAATCACG CCACGTCACC
ATGTTATCGA TCGCCGGCGT CATCGGCGCC AGCCTGTTTG TCGGTTCCAG CGTGGCGATT
GCGGAGGCCG GCCCTGCGGT ACTGCTGGCC TATCTGTTCG CAGGACTTTT AGTCGTCATG
ATTATGCGAA TGCTGGCTGA AATGGCCGTC GCCACGCCGG ATACCGGTTC TTTTTCCACC
TATGCGGATA AAGCGATCGG CCCCTGGGCC GGGTATACCA TCGGCTGGTT ATACTGGTGG
TTTTGGGTGC TGGTTATTCC GCTGGAGGCC AATATTGCCG CCATTATTCT GAATTCATGG
ATACCGGGTA TTCCGGTGTG GCTATTTTCA TTAGTGATTA CGCTTGCCTT AACCGGAAGC
AATTTATTGA GCGTCAAAAA TTACGGCGAA TTCGAATTCT GGCTGGCGCT ATGTAAAGTG
ATTGCTATCC TGGCGTTTAT CGCGCTGGGC GCGACGGCGA TTAGCGGTTT TTATCCGTAT
GCCGAGGTAA GCGGTATCTC CCGGCTATGG GATCACGGCG GTTTTATGCC TAACGGCTTC
GGCGCGGTGT TAAGCGCCAT GTTGATCACC ATGTTCTCTT TTATGGGCGC GGAAATCGTC
ACTATTGCTG CCGCGGAATC CGATACGCCG GATAAACATA TCGTACGCGC CACCAATTCT
GTTATCTGGC GAATTTCCAT CTTTTATCTG TGTTCCATTT TTGTGGTGGT GGCGCTGATC
CCGTGGAATA TGCCGGGCCT GAAAAGCGTA GGTTCGTACC GCTCGGTACT GGAGCTGCTT
CATATTCCGC ACGCAAAATT CATTATGGAC TGCGTGATTT TGTTGTCGGT GACCAGTTGT
CTGAACTCCG CATTATATAC CGCCTCCCGG ATGCTCTATT CCCTTAGCCG CCGCGGCGAT
GCGCCTGCGA TAATGGGAAA AACTAACCGT AGCAAAACGC CCTGGGTAGC GGTTCTCCTC
TCTACCGGCG CGGCCTTTTT AACCGTTATC GTCAATTATT ACGCCCCGGC AAAAGTGTTT
AAATTTCTTA TCGACAGTTC TGGCGCCATC GCGCTGCTGG TCTATCTGGT GATTGCGATT
TCGCAATTGC GGATGCGTAA AATTCTGCTG GCGCAGGGCG GAGAAATTAA GCTGAAAATG
TGGCTTTATC CGTGGCTCAC CTGGCTGGTT ATCGGCTTTA TCTGCTTTGT CCTGGTGGTG
ATGCTGTTTC GACCAGCACA GCAACTAGAA GTCATTTCGA CGGGGCTGTT AGGGCTGGGC
ATAATAGGTA CTGTCCCCAT TATGTCTCGC TGGAAAAAAC TGATAAGGTG GCAAAAAGCC
CCCCTGCAAA ACCTACGTTA G
|
|---|
| Protein sequence | MGQLSESHAL GGGLKSRHVT MLSIAGVIGA SLFVGSSVAI AEAGPAVLLA YLFAGLLVVM
IMRMLAEMAV ATPDTGSFST YADKAIGPWA GYTIGWLYWW FWVLVIPLEA NIAAIILNSW
IPGIPVWLFS LVITLALTGS NLLSVKNYGE FEFWLALCKV IAILAFIALG ATAISGFYPY
AEVSGISRLW DHGGFMPNGF GAVLSAMLIT MFSFMGAEIV TIAAAESDTP DKHIVRATNS
VIWRISIFYL CSIFVVVALI PWNMPGLKSV GSYRSVLELL HIPHAKFIMD CVILLSVTSC
LNSALYTASR MLYSLSRRGD APAIMGKTNR SKTPWVAVLL STGAAFLTVI VNYYAPAKVF
KFLIDSSGAI ALLVYLVIAI SQLRMRKILL AQGGEIKLKM WLYPWLTWLV IGFICFVLVV
MLFRPAQQLE VISTGLLGLG IIGTVPIMSR WKKLIRWQKA PLQNLR
|
|---|
| |