Gene SeAg_B1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1960 
SymbolsifA 
ID6793743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand+ 
Start bp1903288 
End bp1904298 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content40% 
IMG OID642776186 
Productsecreted effector protein 
Protein accessionYP_002146817 
Protein GI197251432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.60534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATTA CTATAGGGAA TGGTTTTTTA AAAAGTGAAA TCCTTACCAA CTCCCCAGGG 
AATACGAAAG AAGCATGGTG GAAAGTTTTA TGGGAAAAAA TTAAAGACTT CTTTTTTTCT 
ACTGGCAAAG CAAAAGCGGA CCGTTGTCTA CATGAGATGT TGTTTGCCGA TCGCACCCCC 
ACACGAGAGC GACTTACAGA GATTTTTTTT GAGTTAAAAG AGTTAGCCTG CGCATCACAA 
AGAGATAGAT TTCAGGTTTA TAATCCTAAT GAAAATGATG ACACTATTAT TCTTCGCATC 
ATGGATCAAA ACGAAGAGAA CGAATTGTTA CGTATCACTC AAAATACCGA TGCCTTTACC 
TGTGAAGTCA TGGGGAATGC TTATTTTTTA ATAAAAGATC GCCCGGATAT TTTAAAACCG 
CATCCACAAA TGACGGCCAT GATTAATAGA AGATATAGCG AAATCGTAGA TTACCCCCTC 
CCTTCGACAT TATGTCTCAA CCCTGCTGGC GCGCCGACAT TATCGGTTCC ATTAGACAAC 
ATAGAGGGGT ATTTATATTC TGAATGGAGA AAAGGAAATT TAGATGAGTG GAAAACGCAA 
GAAAAGGTAA CCTACCTGGC AGCGAAAATT CAGTCTGGGA TTGAAAAGAC AACGCGCATT 
TTACAGCATG CGAATATATC CGAAAGTACT CAGCAAAACG CATTTTTAGA AACAATGACG 
ATGTGTGGCT TAAAACAGCT TGAAATACCA CCACCACATA CCCACATACC TATTGAAAAA 
ATGGTAGAAG AGGTTTTACT GGCGGATAAG ACGTTTCAGG CGTTCCTTGT AACGGATCCC 
AGCGCCAGCC TAAGCATGTT AGGTGAGATA ATCGAAACCC TCTCTGATCA GGTTTTTCAC 
GCCATTTTTA GAATAGACCC CCAGGCTATA CAAAAAATGG CGGAAGAACA GTTAACCACG 
CTACACGTTC GCTCAGAACA ACAAAGCGGC TGTTTATGTT GTTTTTTATA A
 
Protein sequence
MPITIGNGFL KSEILTNSPG NTKEAWWKVL WEKIKDFFFS TGKAKADRCL HEMLFADRTP 
TRERLTEIFF ELKELACASQ RDRFQVYNPN ENDDTIILRI MDQNEENELL RITQNTDAFT 
CEVMGNAYFL IKDRPDILKP HPQMTAMINR RYSEIVDYPL PSTLCLNPAG APTLSVPLDN 
IEGYLYSEWR KGNLDEWKTQ EKVTYLAAKI QSGIEKTTRI LQHANISEST QQNAFLETMT 
MCGLKQLEIP PPHTHIPIEK MVEEVLLADK TFQAFLVTDP SASLSMLGEI IETLSDQVFH 
AIFRIDPQAI QKMAEEQLTT LHVRSEQQSG CLCCFL