Gene SeAg_B0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B0330 
Symbol 
ID6796488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand+ 
Start bp324234 
End bp324839 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content49% 
IMG OID642774623 
Productgram-negative pili assembly chaperone 
Protein accessionYP_002145280 
Protein GI197248825 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.580697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTTATC ACGCTGGTAC ACCCGGCGCG ACGCTCTCGG TGAGCAACCC GCAGGATTAC 
CCTATTTTGG TTCAGTCTTC AGTCAAAGCA GAAGACAAAA ATTCGCCAGC CCCCTTTATG 
GTGATGCCGC CTCTATTTCG TTTAGAAGCG AACCAGCAGA GTCAACTGCG TATTATCCGT 
ACTGGTGGTG ACATGCCAAC GGATCGTGAA ACTTTACAGT GGGTCTGTAT AAAGGCGCTA 
CCACCCGAAA ATGAACCGTC GGATACACAG GCTAAGGGCG CGACCCTTGA CCTCAATTTG 
TCCATCAGCA CCTGTGACAA GCTGATTTTC CGCCCGGATG CCGTGAAGGG GACGCCGGAA 
GATGTTGCAG GAAATTTAAG ATGGGTGGAG ACGGGCAACA AACTTAAGGT AGAGAACCCC 
ACCCCGTTTT ACATGAATTT AGCCTCTGTC ACAGTAGGGG GAAAGCCCAT TACAGGGCTT 
GAGTATATCC CCCCCTTTGC TGACAAAACA CTAAATATGC CAGGTGGCAC TCGTGGTGAT 
GTCGAGTGGA AAATTATTAC AGACTTAGGT GGTGAAAGTC ATCCGTTCCA CTACGTTTTT 
AAATAA
 
Protein sequence
MIYHAGTPGA TLSVSNPQDY PILVQSSVKA EDKNSPAPFM VMPPLFRLEA NQQSQLRIIR 
TGGDMPTDRE TLQWVCIKAL PPENEPSDTQ AKGATLDLNL SISTCDKLIF RPDAVKGTPE 
DVAGNLRWVE TGNKLKVENP TPFYMNLASV TVGGKPITGL EYIPPFADKT LNMPGGTRGD 
VEWKIITDLG GESHPFHYVF K