| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_4042 |
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| Symbol | |
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| ID | 6780905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4594201 |
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| End bp | 4596597 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642770035 |
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| Product | DEAD_2 domain protein |
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| Protein accession | YP_002140828 |
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| Protein GI | 197120401 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCTG CACCCAATCT CATCAACATC CCGGTAGGAT ATTTCGCCCT TCCCGTCCCG
CGCACCGGGA GCATCGAGCC CCGTTCCGGC TACGACCGCT CCACCGCGGA GGGGCGCGAA
ATTCACCTTA AGATCCAGAA AAAGCGCGCG CTGGCGGACG CTAGCTACCA GGCCGAAGTG
CCGGTCAGCC GCATCTTCGA AAGGGGAGGG CACCAGTTCC AGGTGAACGG TCGCCTGGAC
GGGATCTTCC GCCACGCCCC ACCCTTAATT GAGGAGATCA AGAGCTGCTT CAACCTGTGG
GAGCTCCGGC GCCGGCTGGC TCACGCGGGC ACGAACGAGC CGTATTCGCT GCAGCTTCTC
ACCTACGGCT ACTTCCATTG GCTGGAGCAC GGCGTGATAC CGCGCCTCTC CTTCCACCTC
GTTTCCTCCC GTAACGGCGC CTCGGAGGAC CTTCCGGTGC AACTGGACTT GGAGGCGTAC
CGGGGCTGGC TGGAGCTGCG CCTGGACGAA CTGGCGCGGG AGGCGGACGA GGCCTCGAAG
CGCGCCCGTA GAAGAAAGAA GGCGGCAAAG GAGTTTCCTT TTCCCTTCGC CACCCCCCGC
CCCGGACAGC TTGAGCTGAT GGGGGAGATA GAGTCCGGCA TGGCCGATGG GCGCGCCATG
CTGATATCGG CGCCGACCGG GCTGGGAAAG ACCGCGGGGG TCCTGCACCC GGTTCTGAAG
GAGGCGCTCG GGCGCGGCCA GACGGTCTGC TACGTGACGC CGAAAAACAG CCAGCACGAG
GTGGCGGAGG ACGCCATGGA GCGCTTTCGC GAGTCGGGGG TGCGGCTGCG CTCCCTCACC
GTCACCGCGA AGAGCAGGAT CTGTTTCATG AACGAACCTG TCTGCACGCC GGAGTACTGC
GAATATGCGC GCGATTACTA CGGCAAGCTA GCCCGGCTGG GCGTAGTCGA GCTGATGGCC
AGGAAAAGGA AGCTGAAGGC GCGGACCTTC AGGGAGTTCG GGGAGAAGTA CCAGCTTTGC
CCCTTCGAGC TGCAGATCGA AGCGGTGCCG CTGGCCGACG TCGTCATCTG CGACTACAAC
TACGTCTTCG CCCCCAGGTC CGCTCTGGGG CGGGCCGCGG CACTCGCCGT GGAGCAGAGC
GGGAAGCCGA ACCTGGTGAT AGACGAGGCG CATAACCTCC CCTCCCGCGC CATGGATTAC
TACTCCCCCA GGCTTTCCAG CGTGCTTTTG GTGGGGATGC GGGGCGAGCT GGCGGAGCTT
CCCAACCCGT TCCGGCGCGA CGCGCTGGAA CTTCTGGAGG AATGCCTGGC GGCGGTGGCG
TCCTGCAGCG GTAGCGGAAA AGGGATGCGC CCGGTGAAGA TAGAGCCCCC CCTGGCCCCA
TTCCTTGAGC TGGACGGAAG GCTGCGCGCC TTGCTGTCGC GCTACCTGGA GGCTGAGGTG
GAGATCAGGC AGAAGGACCC GGTCTTGAGG CTGTGCCATT ACTGGGGGGA GTTTGCCGAG
ATCCTGGAGT TCGCCACCGC CTCGAAGCGG CAGGAGTTTT TCACCTCCTA TGAGCCGCAT
TCCGGAGGGG GGAGCATCAA GATCACCTGC TGCGACGCCT CCGCCCTCAT TGCGGACCGG
TACGGGGAGT ACCAGCAGGT GGTGGCTTTC TCCGCAACCC TGAAGCCGTT CGAGTACTAC
GCGAAGCTTT CCGGGCTCGA TCCCGAAAAG GTGCGCTGCG CCGAATTCCA GAGCCCCTTT
CCCAGCAGCC AGCGCAAGCT GATGATCATC CCGCAGATCT CGACCAGGTA CTCCCGGCGC
GAACGCAATT ACGGCAGGAT CGCCGACGCG CTGGCCCGGG TGGTGGCGCT GAAAGGCGGC
AACTACCTGG CATTTTTCCC GAGTTTCGTT TTCCTTGAGC GGGTGGCGGA GCTCTTTCGG
GCGCCGGAAG GGTTCGAGGT GCTGCTCCAG GAGAGGAAGA TGAGCGGGGC GAGGGTGGCC
GAGATCCTTG AGCGGCTGCG CGCGGGGAAC GCCCCGACGC TTGTCTTCGC CGTCCAGGGA
GGTTCCCTTT CGGAGGGGGT GGATTACGCG GGGGACATGG TGATCGGCGC CTTCGTGGTC
GGTCCCCCCC TTCCCAACTT CGACCTGGAG CGGGAGGAGA TGAGGGGGTA CTACCAGCGC
CATTACGGCA ACGGGTACCA GTACGCCTAC ACCATTCCGG CCATGGCCAA GGCGATCCAG
GCGGCGGGGC GGGTGATCCG CTCGGAAACG GACCGCGGTC TGATCGTCCT GATGGACGAC
CGTTTCTTGC AAGAGGAGTA CAGTTCCGCC ATGCCTGGGG ATTGGTTCGA GTCAGGGGCA
AAGGAGCTGG TCTCGGATGC CATATTGAGC GATATCAGGG AGTTTTGGGG ACGGTGA
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| Protein sequence | MKPAPNLINI PVGYFALPVP RTGSIEPRSG YDRSTAEGRE IHLKIQKKRA LADASYQAEV
PVSRIFERGG HQFQVNGRLD GIFRHAPPLI EEIKSCFNLW ELRRRLAHAG TNEPYSLQLL
TYGYFHWLEH GVIPRLSFHL VSSRNGASED LPVQLDLEAY RGWLELRLDE LAREADEASK
RARRRKKAAK EFPFPFATPR PGQLELMGEI ESGMADGRAM LISAPTGLGK TAGVLHPVLK
EALGRGQTVC YVTPKNSQHE VAEDAMERFR ESGVRLRSLT VTAKSRICFM NEPVCTPEYC
EYARDYYGKL ARLGVVELMA RKRKLKARTF REFGEKYQLC PFELQIEAVP LADVVICDYN
YVFAPRSALG RAAALAVEQS GKPNLVIDEA HNLPSRAMDY YSPRLSSVLL VGMRGELAEL
PNPFRRDALE LLEECLAAVA SCSGSGKGMR PVKIEPPLAP FLELDGRLRA LLSRYLEAEV
EIRQKDPVLR LCHYWGEFAE ILEFATASKR QEFFTSYEPH SGGGSIKITC CDASALIADR
YGEYQQVVAF SATLKPFEYY AKLSGLDPEK VRCAEFQSPF PSSQRKLMII PQISTRYSRR
ERNYGRIADA LARVVALKGG NYLAFFPSFV FLERVAELFR APEGFEVLLQ ERKMSGARVA
EILERLRAGN APTLVFAVQG GSLSEGVDYA GDMVIGAFVV GPPLPNFDLE REEMRGYYQR
HYGNGYQYAY TIPAMAKAIQ AAGRVIRSET DRGLIVLMDD RFLQEEYSSA MPGDWFESGA
KELVSDAILS DIREFWGR
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