| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_4041 |
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| Symbol | |
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| ID | 6780904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 4592364 |
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| End bp | 4594223 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642770034 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002140827 |
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| Protein GI | 197120400 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACG GGAGTCCCAC CGACAAACAG GCCCTGGAGC AGCAGTTGAC TGCCCTGCGC
AGGGAAAACG AGGAGCTGGC CCAACAGGTC AAACGGCTGA TCAGGGCCGA AGGGAAGCTC
TACGAGTACC AGCAGGTGCT CGACCTCCAG TTGAACGAGT ACAAAGGGCT TTACGACCTG
AGCAGGAGGC TGAGCGGGAG CTTCTACATC CAGGGCCTGT TCCGCGAGAC CGTGCAGTAC
GTGGTCCAGC AGCTGGAGTA CGAACGGGCT ATCCTGCTCC GCCGCGAAGA AACGGTTACC
TACCGCGTCT TGGCCCTTGA CGGCTACTAC GATCCAAGCG AAAAAGAACA GGCCGCCGCC
ATTACCATGA AGTACGGCGC CCCCTGCCTC TCCCCCCTTC TAGCAGGCAG GGAGCATGTC
ACCTGCACCG CAACCTCGAC GGAACCCGGA AACGGATGCC GACGGCGCCT ACTGATGGAC
GAGTTCCTGG TATACCCCCT AGGCCACGAC GAGGTCCCCC ACGCCCTGCT GGTGGTCGGC
AACACCGCGA CCAATGCACC CTTTCACCGG CGGGTGCAGG AAAGCGACCA GGCGCTCCTC
AGCATGGGAA ACCTGGTCGG TCTCGTATCA TCCATTCTGG ATACCCACAT ATTTTTCGAA
CGAATGATGG AGGCCCGCGA GCAGGAACGG GTCGCCGAGG CGAAGTACCG CAGCCTTTTC
GAGAACGCGG CGGAGGGGAT CTTCCGCAGG ACCCCCGAGG GGAGGTACCT CGACGCGAAC
CCCGCCCTCG CGCACATGCT TGGCTATGCC TCTCCCGCGG AGCTGGTCGC CTCCATCACC
GACATCGGTA CCGAGGTCTA CGTGGACCCC GCCTCCTATG CGGAGATGCA GAGGGTGCTG
GCGGTCCACG GCAGGGCCGA AAGTTTCGAG ACGCAGATCT ACCGCAAGGA CGGCAGTGTG
ATCTGGGTAT CCCTGAGCCT GCGCGCAGTG CGGGACAGCG AGGGGAAGGT GCTCTTTTAC
GAGGGGATGT CCGAGGAGAT CACCAAGCGT AAGATTGCCG AGGCCGCGCT GCGCGAGAGC
GAGCAGAAGT ACCGCCAGTT GAGCGAGGCG CTGGAGCGGC GCGTGAAGCA GGCGGTCGAC
GAACTGCGCC AGAAGGACAA GATGCTGATC CTGCAGGGGC GGCAGGCGGT GATGGGGGAG
ATGCTGAGCA ACATCGCCCA CCAGTGGCGC CAGCCCCTGA ACATGCTGGC CTTGCTGGTC
CAGGACGTCC AGTTGACCCA CAGGCAAACC GGGCTCAGCG AAGAGTTCAT ATGTGAGAAC
GTCAGAAGGA GCATGGAGAT CATCCAGCAG ATGTCCCAAA CCATAGACGA TTTCAGGTAT
TTCTACCGCC CGGACCGGGA AAAACTTGAG TTCACGGTGA GCGAGCCTTT GGATAAGGCG
CTGGCCCTGT TGAATGGGAG CTTAAGGATA CACAGTATAG AGATCCAGGT CCTTAAAACC
GGCGAACCTT CAATCAAGGG ATATCTCGGA GAGTTCGTCC AGGTCCTGCT CAACATCCTG
ATCAACGCTC GCGACGCGCT CATCGCCAGC CGCGCCGCTT CGCCGCTCAT CACCGTCAGG
CTCTACGAGG AAGGCGGGGA AACGGTGGTC AGGATCGCTG ACAACGCCGG CGGCATCCCC
GAGGAGATCA AGGAGAAGAT CTTCGAACCC TACTTCACCA CCAAAGGGCC CGAGCAGGGA
ACCGGCATCG GGCTTTTCAT GTGCAAGACC ATCATCGAGA AGAGCATGAA CGGCAGGCTC
TGCGCCAGTA ACAGCGGCGA GGGAGCCGAG TTCGTCATCA CCGTCCCCAA AACTCCCTGA
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| Protein sequence | MKNGSPTDKQ ALEQQLTALR RENEELAQQV KRLIRAEGKL YEYQQVLDLQ LNEYKGLYDL
SRRLSGSFYI QGLFRETVQY VVQQLEYERA ILLRREETVT YRVLALDGYY DPSEKEQAAA
ITMKYGAPCL SPLLAGREHV TCTATSTEPG NGCRRRLLMD EFLVYPLGHD EVPHALLVVG
NTATNAPFHR RVQESDQALL SMGNLVGLVS SILDTHIFFE RMMEAREQER VAEAKYRSLF
ENAAEGIFRR TPEGRYLDAN PALAHMLGYA SPAELVASIT DIGTEVYVDP ASYAEMQRVL
AVHGRAESFE TQIYRKDGSV IWVSLSLRAV RDSEGKVLFY EGMSEEITKR KIAEAALRES
EQKYRQLSEA LERRVKQAVD ELRQKDKMLI LQGRQAVMGE MLSNIAHQWR QPLNMLALLV
QDVQLTHRQT GLSEEFICEN VRRSMEIIQQ MSQTIDDFRY FYRPDREKLE FTVSEPLDKA
LALLNGSLRI HSIEIQVLKT GEPSIKGYLG EFVQVLLNIL INARDALIAS RAASPLITVR
LYEEGGETVV RIADNAGGIP EEIKEKIFEP YFTTKGPEQG TGIGLFMCKT IIEKSMNGRL
CASNSGEGAE FVITVPKTP
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