| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_4018 |
|---|
| Symbol | |
|---|
| ID | 6780881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 4561586 |
|---|
| End bp | 4562677 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642770011 |
|---|
| Product | peptidase M24 |
|---|
| Protein accession | YP_002140804 |
|---|
| Protein GI | 197120377 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGCA CCGCGCGCGC GGAGGAGATG GCCGTAAAGA TCCGCCTGGT CCGGGAGCTG
CTCGGCGAGG GAAGGGTGCT GAGGCTCAAG GGGATCGACT GGTTCTCCTG GATCACGGCG
GGGGGCTCCA ACGAGGTGCT CTTGGCGGCC GAGACCGGGA TCGCCGAATT CGTAGTGACC
GAACGCGGCG CCTTCGTGGT GACCAACGAG ATCGAGGCGC AGCGCCTGAT CGACGAAGAG
CTCCCCCCCG GCTGCGAGGT GCGCATACTC CCCTGGGCCT ACCCTTCCCA GTTGGAGGTG
GTGATGAGGG AGCTGGCCGA AGGGACGCCG GTCTATTCGG ACCGCCCGGC GGAGGCCGAG
CGGGAGCTCC CGCTGCCGCT TCTGGCGGCG AAACGCACCC TCTCTCTCCC CGAACTGCAC
CGCTACCGCG AGGTGGGGCT TCTCGCCTCG CAGGCGATGA CCGAGACCCT GCAGCAGGCG
AACCCCGACT GGAGCGAGTA CCGGCTGGCC GCGGCCGGCG CCTCCGCCCT CCTCTCGCGC
GGGCTCGCCC CCTGCCTGGT CATGGCGGCC GGAGACAGGC GCCGCCGCCT GTACCGCCAT
CCGATATCGG GGAAGGACCC GCTGGGCGCC TCCGCGATGC TGGTCTTCTG CGCTCGGGGG
TACGGCCTCT ACGCCAACCT CACCAGGTTC ATCGCCTTCG AGCCTCTAAC CGACGAGGAG
GAGCAAAAGC ACGCGCAGGT GCGCGAGATC GAGGCCCACG CGCTGCTCCT CTCCCGCCCG
GGGGTCCTTT TGCACGAGGT CTACCGCGAG CTTGCCTCGG CCTACGCCGC GGCGGGTTAC
GAGCACGCCA TCAAGGAGCA CCACCAGGGG GGGATCACCG GCTACCTTTC CCGCGAAGTG
ATAGCGAACC CCGAGGCGCG GGAGCACCTG AGCGCCGGGA TGGCCGTCGC CTGGAACCCG
AGCCTCCCCG GCGCGAAGAT AGAGGATACC TTTTTGGTGA CAGAGACCGG AGTCGAGAAC
CTGACGCTCG ACCCGGCCTG GCCGACGGTG CTAGCGGCCG GCCTGGAGCG GCCGCTCGTC
CTTCGGCGAT AG
|
|---|
| Protein sequence | MNGTARAEEM AVKIRLVREL LGEGRVLRLK GIDWFSWITA GGSNEVLLAA ETGIAEFVVT
ERGAFVVTNE IEAQRLIDEE LPPGCEVRIL PWAYPSQLEV VMRELAEGTP VYSDRPAEAE
RELPLPLLAA KRTLSLPELH RYREVGLLAS QAMTETLQQA NPDWSEYRLA AAGASALLSR
GLAPCLVMAA GDRRRRLYRH PISGKDPLGA SAMLVFCARG YGLYANLTRF IAFEPLTDEE
EQKHAQVREI EAHALLLSRP GVLLHEVYRE LASAYAAAGY EHAIKEHHQG GITGYLSREV
IANPEAREHL SAGMAVAWNP SLPGAKIEDT FLVTETGVEN LTLDPAWPTV LAAGLERPLV
LRR
|
|---|
| |