Gene Gbem_3979 details

Gene Information

• Locus tag: Gbem_3979
• ID: 6780843
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 4516199
• End bp: 4516957
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 642769974
• Product: Carboxymuconolactone decarboxylase
• Protein accession: YP_002140767
• Protein GI: 197120340

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.22073
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAGAC TTATTATTGA GTTCCTGGCA ATCACGTTCG CCATGATGTG CATCATGGCA 
GCCATAGCGG AGGCACAACC CATGGACAAA AACCAAACTT TAAACTCAAA GCAGCAAGGC 
ATTATCCCCA TAGCCGCCTT TACCGCCAAC GGAGACATTG AAAAGCTCGA AACTGCTCTG 
AACAAAGGGC TGGATGCCGG GCTGACCGTG AACGAAATCA AGGAAATCCT GGTGCAACTA 
TATGCCTATA CGGGGTTTCC GCGCAGCCTG AACGGACTTG GCGCTTTTAT GAACGTTGTG 
GAACAACGGG AGAAGAAGGG CATCAAGGAT CAACTCGGAA AGGAACCCGG CAAAATGCCT 
GCTGGTAAAA GCAGCATCGA GCTTGGCACA GAAATACAGA CGCAATTGGT AGGCAAGCCG 
GTCACTGGGC CGATCTATGC TTTCGCTCCC GCCATCGACG CGTTTTTGAA AGGCCACTTG 
TTCGGCGACA TCTTCGGACG CGACAACCTG GACTTCCAGA GCAGGGAGAT TGCCACCATT 
TCCGCTCTGG CCGCTATGAA GGGGGTCAAT CCCCAACTGC AGGCCCATTT CAGCGTCGGT 
TTTAATACCG GTTTGTCCGA GTTGCAGATG CGCGGTCTGA TAACCGTTCT TGCCGCCAGT 
GTCGGCAGGA GTGAAGCCGA TAATGCGAGT GAAGTATTGG ACAAATCGCT CAAACTTGTC 
GGTGTGGTCC CGATTGTCTC GGGTAGGAAA TCAAAGTAA 

 

Protein sequence

MNRLIIEFLA ITFAMMCIMA AIAEAQPMDK NQTLNSKQQG IIPIAAFTAN GDIEKLETAL 
NKGLDAGLTV NEIKEILVQL YAYTGFPRSL NGLGAFMNVV EQREKKGIKD QLGKEPGKMP 
AGKSSIELGT EIQTQLVGKP VTGPIYAFAP AIDAFLKGHL FGDIFGRDNL DFQSREIATI 
SALAAMKGVN PQLQAHFSVG FNTGLSELQM RGLITVLAAS VGRSEADNAS EVLDKSLKLV 
GVVPIVSGRK SK