Gene Gbem_3897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3897 
Symbol 
ID6780761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4433563 
End bp4435125 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content62% 
IMG OID642769892 
Productacetyl-CoA hydrolase/transferase 
Protein accessionYP_002140685 
Protein GI197120258 
COG category[C] Energy production and conversion 
COG ID[COG0427] Acetyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAAT TGCACAGCAG AATCAGGAAA TCCAGCCTTC GCGGCAGGAT CAAGACCGTC 
GATGAAGTGA TCCCGATGTT CAAGAACGGG ATGAACGTAG GGTGGTCCGG GTTTACCCCC
GCCGGTTACC CGAAGATGGT CCCCATCGCC CTGGCGGACC ATGTGGAAAA GAACCAGTTG
CAGGGAAAGC TGAAGTTCAA CCTGTACATC GGCGCATCGG TCGGGGTCGA GACCGAGGAC
CGCTGGGCGT CGCTCGACAT GATCGACCGC CGCTGGCCCT ATCAGACCGG TAAGAACATC
CAAGCCGGCA TCAACGAAGG GCGCATCCGG ATGGGTGACA AGCACCTCTC CATGTTCGCC
CAGGACCTTG GCTACGGCTT CTACACCAAG CACAACGACG GCCGCCTCGA CATCGCCATC
ATCGAGTGCT CGGCGATAAC CGAGAACGGC GAGCTGGTCC TCACCGCCTC CTGCGGCGCA
GTCCCCGAGA TCGTGCAGAT CGCTGACAAG ATCATCATCG AGATCAACAC CTCGATCCCG
AGCTTCGAAG GGTTGCACGA CATCGTCGAG CCGATCGCTC CGCCCAACCG CCTCCCCTAC
CTGATCTGCC GCGTCGACGA CCGTGCCGGT TCCCCGTACG TCCGCGTCGA TAACGACAAG
ATCGTCGCCA TCGTCGAGTC CAACCGTCCC GACAACGGCC GCGCCTTCAG CGAGCAGGAC
GACACCTCCG AAGCCATCGC CAACAACATC ATCGACTTCT TCTCCCACGA GGTGAAGGTG
GGAAGGCTGC CGAAAAACCT GCTGCCGCTG CAGTCCGGCG TGGGCTCCAT CGCCAACGCG
GTCATCGGCG GGCTGGCCAA CGGCCCGTTC ACCGGCCTCA AGGTCTGGAC CGAGGTGCTG
CAGGACACCA TGCTCGACTT CTTCGACTCC GGCAAGCTCG ACTTCGCCTC TACGGTCTCG
CTTTCATTCT CGGTCGACGG CTTCAAGCGC TTCTACGACA ACTGGGACAA GTACAGCGAC
AAGGTGATGA TGCGTCCGCT CTCCATCGCC AACCACCCCG AGCCGATCCG CCGCCTCGGC
TGCATCGCGA TGAACACCCC GGTGGAGTTC GACATCTACG CCCACGCGAA CTCCACGCTG
GTAGGCGGTA CCCGGATGAT CAACGGCATC GGCGGCTCCG GCGACTTCCT CAGGAACGCG
TACCTCTCCA TCATGCACAC CCCGTCGGCG CGCCCGACCA AGACCGATCC GACCGGCATC
ACCTGCGTCG TTCCGCACGT GCCGCACGTC GACCATACCG AGCACGACCT TGACGTGCTG
GTCACCGAGC AGGGTCTTGC CGACCTGCGC GGCCTCGACC CGAAAAGCCG CGCCAAGCTC
ATCATCGAGA AGTGCGCGCA CCCCGATTAC AAGCCGCTTT TGCAGGACTA CTTCGAGCGC
GCGGCAAAGG ACTGCCTGGC ACGCAAAGCA GGGCACGAGC CGCAGCTTCT GGACCGCGTC
TTCAAGATGC AGGTGAACCT GGCCCAGAAA GGGACCATGA AGATCGACAG CTGGGACATC
TAG
 
Protein sequence
MSELHSRIRK SSLRGRIKTV DEVIPMFKNG MNVGWSGFTP AGYPKMVPIA LADHVEKNQL 
QGKLKFNLYI GASVGVETED RWASLDMIDR RWPYQTGKNI QAGINEGRIR MGDKHLSMFA
QDLGYGFYTK HNDGRLDIAI IECSAITENG ELVLTASCGA VPEIVQIADK IIIEINTSIP
SFEGLHDIVE PIAPPNRLPY LICRVDDRAG SPYVRVDNDK IVAIVESNRP DNGRAFSEQD
DTSEAIANNI IDFFSHEVKV GRLPKNLLPL QSGVGSIANA VIGGLANGPF TGLKVWTEVL
QDTMLDFFDS GKLDFASTVS LSFSVDGFKR FYDNWDKYSD KVMMRPLSIA NHPEPIRRLG
CIAMNTPVEF DIYAHANSTL VGGTRMINGI GGSGDFLRNA YLSIMHTPSA RPTKTDPTGI
TCVVPHVPHV DHTEHDLDVL VTEQGLADLR GLDPKSRAKL IIEKCAHPDY KPLLQDYFER
AAKDCLARKA GHEPQLLDRV FKMQVNLAQK GTMKIDSWDI