Gene Gbem_3867 details

Gene Information

• Locus tag: Gbem_3867
• ID: 6780731
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 4404147
• End bp: 4406069
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642769862
• Product: peptidase C1A papain
• Protein accession: YP_002140655
• Protein GI: 197120228
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4870] Cysteine protease

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAGC CGAAACTGGT GACGAAGGAT GGACGGAAGT TGTACGTCAG GCCGGACACG 
CTGGATTTCA GGGACAGGAT GTTCGTGCCG ACGCTGTTGG AGGTCCCGAT GCGGATGGAG 
CTGGAAAGCT ACCTCGAATA CGAGGTTCCC ATCCTGGACC AGGGAACCGA AGGGGCCTGC 
ACTGGCTTCG GCCTGGCCAC GAACGTCAAC TACCTTTTGC GCAAACGCAG GGTTATCCCG 
GACACGGTCA GCGTCAGCCC CTGGATGTTG TACCAGCTGG CCAAGCGCTA CGACGAGTGG 
CCTGGGGAGA ACTACGAGGG GTCGAGCGCG AGGGGCGCCA TGAAGGGGTG GCACAAGCAC 
GGGGTCTGTG CCACCGGCCT GTGCGAGAAG GGGGGACGCC TGAGCGAGGA GGCGCTGAAG 
GACGCTCCCA AGCGCTCGCT GGGTGCCTAT TTCCGGGTGA ACCACAAGGA CCTGGTGGCG 
ATGCACAGCG CCCTGGCTGA GGTGGGGATC CTCTTCGCCA CCTCGAGCGT TCACAGCGGC 
TGGGAAAACG TCGGCTCCGA CGGGGTGATC AAGAGATCGG ACACCGTCAT AGGTGGGCAC 
GCGTTCGCCA TCGTGGGCTA CGACGAGGAC GGCTTCTGGA TGCAGAACTC CTGGGGAAAG 
GACTGGGGCA AGGGGGGCTT CGCCCGCATC GGCTATGACG ACTGGCTTGC CAACGGCGAC 
GACGCCTGGG TGGCGCGGCT GGGGGTGCCG ATGAACCTCC ATGCGCCGGA GTCGACGGCC 
ATCGGGAGCT CCGCGGCGAT CAGCCATTCC GGCGCCTACT CCAGCACGGA ACTGCGTCGC 
CATATCGTCA GCATCGGCAA CAACGGGGTG CTGCGGCCGG GGGGAAGCTA CGGCACCACC 
AGGCACGACG TGGAGGACAT CTTCGCCAGG GACTTCCCTG CGCTCACGGC GGGGTGGAAC 
AAGAAAAGGC TGCTCCTTTA CGCGCACGGG GGCCTTGTGG ACGAGGCGTC GGCGGTGCAG 
CGGGTGGCCG AATACTGCAC CCAGCTCCTG AAGGCGGAGA TATATCCACT GGCCTTCATC 
TGGCACAGCG ACATGTTCAC CACCATCTGC AACATCCTCA CCGATGCCAT GCACAAGCGG 
AGGTCGGAAG GGTTCCTGGA CGACAGCAAG GACTTCATGC TGGACCGCCT GGACGACGCA 
CTGGAACCGG TGGCGCGGCT GGCAGGAAAG CCGCTTTGGA GCGAGATGAA GCAAAACGCG 
CTCGCTGCCG GGACCGCCGA GGAGGGAGGC GCACGCTTGG CTCTCGAGCA GATCAAGCGG 
CTCCCCGCCG ATGTGGAGAT CCACCTGGTC GGGCACAGCG CCGGATCGGT CTTCCACGCC 
CCGGTGGTCG AGGGGCTGGC GAAGATGGGG CGCCCGATCA AGAGCTGCAC CCTCTGGGCG 
CCGGCATGCA CCACGGCGCT CTTCAAGCAG AGCTACCTCC CTTCCATCGA CTGCGGCCAC 
ATCGGGTGCT TCACCCTTTT CACCTTGAAC GACAAGGCGG AGCAGTGCGA CAACTGCGCG 
CGCATCTACA ACAAGTCGCT CTTGTACCTG GTGTCGAACG CCTTCGAGGC TGAGCCGCAC 
ATCCCGCTCT TCAAGGACGG CGTGCCGCTA TTGGGGCTGG AGCGCTGCAT CGAGAGCGAC 
TCAAGGCTTA GCGATCTCTT CTCCGCAAAG AAAGCGGACT GGGTGAGAGC CCCGAACGAC 
CTGAAGGACT CCCCCTGCGA CTATTCAACG GCCCGCCATC ATGGGGATTT CGATGACGAC 
CAGGCGACGG TCAAGGCGAC CCTTGCGCGC ATGCTGGGGG GGAAAGCGGA ACTCAAAGGG 
GAGTTCCGCT TCGAGGTCAC CAAGTCGTCC TCGCGCCAGA GGCGGGCGAA CATTTCGCGG 
TGA 

 

Protein sequence

MSKPKLVTKD GRKLYVRPDT LDFRDRMFVP TLLEVPMRME LESYLEYEVP ILDQGTEGAC 
TGFGLATNVN YLLRKRRVIP DTVSVSPWML YQLAKRYDEW PGENYEGSSA RGAMKGWHKH 
GVCATGLCEK GGRLSEEALK DAPKRSLGAY FRVNHKDLVA MHSALAEVGI LFATSSVHSG 
WENVGSDGVI KRSDTVIGGH AFAIVGYDED GFWMQNSWGK DWGKGGFARI GYDDWLANGD 
DAWVARLGVP MNLHAPESTA IGSSAAISHS GAYSSTELRR HIVSIGNNGV LRPGGSYGTT 
RHDVEDIFAR DFPALTAGWN KKRLLLYAHG GLVDEASAVQ RVAEYCTQLL KAEIYPLAFI 
WHSDMFTTIC NILTDAMHKR RSEGFLDDSK DFMLDRLDDA LEPVARLAGK PLWSEMKQNA 
LAAGTAEEGG ARLALEQIKR LPADVEIHLV GHSAGSVFHA PVVEGLAKMG RPIKSCTLWA 
PACTTALFKQ SYLPSIDCGH IGCFTLFTLN DKAEQCDNCA RIYNKSLLYL VSNAFEAEPH 
IPLFKDGVPL LGLERCIESD SRLSDLFSAK KADWVRAPND LKDSPCDYST ARHHGDFDDD 
QATVKATLAR MLGGKAELKG EFRFEVTKSS SRQRRANISR