| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3862 |
|---|
| Symbol | |
|---|
| ID | 6780726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 4399898 |
|---|
| End bp | 4400899 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642769857 |
|---|
| Product | citrate lyase ligase |
|---|
| Protein accession | YP_002140650 |
|---|
| Protein GI | 197120223 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3053] Citrate lyase synthetase |
|---|
| TIGRFAM ID | [TIGR00124] [citrate (pro-3S)-lyase] ligase
[TIGR00125] cytidyltransferase-related domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCACTT CACTTCTATC CACCGACGAT TTGTCGCAGG CGCAGGCGCT GGTAGCCGAA
AGCGGCCTGC GCTTCGAGCT TCCCTACGAC GATCTGGTCG GGGTGTTCGA GGCCGGGCGG
CTGGTGGCGG TCGGCGCCAG GCAGGGGCGG GTACTCAAGA TGCTCGTCGT GGCGCCCGCG
CACCAGGGGG GGACCCTGCT CGACGAGGTG GTGACGGAGC TGGTGGGACG CGGCTATCAG
GAAGGGATCG ATTCCTTCTT CATCTTCACC TCGCCGGCAC TGGCACCAAG CTTCGAGTCG
CTCAACTTCA ACCTTTTGGT CGCCTCGGGA AAGACCGCGC TTTTGGAGTA CGGCGACGGG
CTGAGACGCT ACTTGGCCCG GTACAGCCGG CAGGTGTTCC CCGGCAGCAA CGGCGCCGTG
GTGGCCAACT GCAACCCCTT CACCGTGGGG CACCGCTACC TGGTGGAAGA GGCCGCTTCG
AGCGTCGACC ATCTCTACCT CTTCGTGGTG CGCGAGGAGC GCTCATTGTT CCCCTTCCCG
GCGCGCCTTA GGATGGTGCA GGAAGGGACC GCCGATCTCG AAAACGTCAC CGTCCTCGAT
ACCTCCTGGT ACGCCGTCTC CAGCGTCACC TTCCCCACCT ACTTCCTGAA AGACGACGAC
CCGGCCTGCG CCATCCAGAT GGAGCTCGAC CTGCTCCTCT TCGCCACCCG CATAGCACCC
TATTTCCATA TCGCCACCCG CTTCATCGGC TCCGAGCCGT TCAGCCGCAC CACGGCGGAA
TATAACCGCG CCATGCACAG GATCCTCCCC CCCATGGGGA TCGGGGTGCG GGAGCTGGAA
AGAAAGAGCG CGGTCGGCGC GGCAGTGAGC GCCTCAAGGG TGCGGGAGAT GCTGATGCGC
GGCGAACTGG AGGGGATCGC CGAGCTGGTG CCGGTGAGCA CGCTCGACTT TCTCCTCTCC
AGCGAGGGGA TCAAGATCTG GGACAAAGGG GGGGACAAAT GA
|
|---|
| Protein sequence | MVTSLLSTDD LSQAQALVAE SGLRFELPYD DLVGVFEAGR LVAVGARQGR VLKMLVVAPA
HQGGTLLDEV VTELVGRGYQ EGIDSFFIFT SPALAPSFES LNFNLLVASG KTALLEYGDG
LRRYLARYSR QVFPGSNGAV VANCNPFTVG HRYLVEEAAS SVDHLYLFVV REERSLFPFP
ARLRMVQEGT ADLENVTVLD TSWYAVSSVT FPTYFLKDDD PACAIQMELD LLLFATRIAP
YFHIATRFIG SEPFSRTTAE YNRAMHRILP PMGIGVRELE RKSAVGAAVS ASRVREMLMR
GELEGIAELV PVSTLDFLLS SEGIKIWDKG GDK
|
|---|
| |