| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3793 |
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| Symbol | |
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| ID | 6780657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4331491 |
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| End bp | 4332261 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642769788 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_002140581 |
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| Protein GI | 197120154 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAAC GCGTTTTCGT CCACGTCCCC TACCTGCAGA TCGAGCAACA TCTCCCCTTC
ATACTGGAGC GCCGGCTCAA CCCGGAGATC TTCTTTTCCG CCGACGCCCT GGACGCTCTG
GCACCGTCGC AACTTGCCGC CACGGCGGAT GCGCTAAAAG GCGCGGGGCT CAGTTGCACC
ATCCACGCGC CGTTCATGGA CCTGAACCCG GGCTCCTTCG AGAAGATGCT GAGGGCCGCC
ACGGTGCGCC GCTTCCAGCA GGTGCTCGAC GCGGCGCAGA CCCTGCGCCC GGAGGTGATG
GTGTTCCACC CGGGATTCGA CCGGTGGCGC TACGGCGAGG CGGCCGCGCA GTGGCTCGAG
CTGAGCGTAG CGGTCTGGCG GGAGGTGCTG GTGCGGGCCG AGGAGATCGG CACTGTCATC
GCGGTGGAGA ACATCTTCGA GGAGGAGCCC TCAACCCTGA AGGCGCTGTT CGAGGCGGTG
GAGCACCAGC GCTTCGGGCA CTGCTTCGAC GTCGGGCACT GGAACCTGTT CAAAAAGGTG
GGGATGGCCG AGTGGTTCGA GGCGCTGGGG GGGAGGATTG CCGAGGTGCA TATTCACGAC
AACGGCGGCA CCCGCGACGA GCATGCCCCT CCGGGCGAAG GGGGGATCGA CTTCAAGCAG
TTCTTCGACC TGATGGAGCG CTACGCCCCC GACGCGGCCT ACACCATAGA GGCGCACAGC
ATGAAGGATC TGGAGAGGTC CCTGGAGGCG CTCAAGCCTT ACCTGGGGTA G
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| Protein sequence | MPKRVFVHVP YLQIEQHLPF ILERRLNPEI FFSADALDAL APSQLAATAD ALKGAGLSCT
IHAPFMDLNP GSFEKMLRAA TVRRFQQVLD AAQTLRPEVM VFHPGFDRWR YGEAAAQWLE
LSVAVWREVL VRAEEIGTVI AVENIFEEEP STLKALFEAV EHQRFGHCFD VGHWNLFKKV
GMAEWFEALG GRIAEVHIHD NGGTRDEHAP PGEGGIDFKQ FFDLMERYAP DAAYTIEAHS
MKDLERSLEA LKPYLG
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