Gene Gbem_3742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3742 
Symbol 
ID6780606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4275990 
End bp4277759 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content67% 
IMG OID642769737 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_002140530 
Protein GI197120103 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTTACC AGGAAAGCGC AGAGAACCAG GCGCGGCTCA AGTACGTGGA GCTGCTGCTC 
AAGAAGGGGA TGCAGGAGGA AGCCCGCACC CAACTGCAGC AGCTGGTGCA GGAAGATCCA
GGCTGCGCGC GGGGCTGGTA CCTCCTCGCC GTGCTGGTGG GGGAGCAGGG GTTCCCGGAC
CAGGCGGCGA AGCTACTGAG GCAGGCGCTT AGGGCCGAGC CGGAGAACGT CAAGGCGCTG
AACGCCCTCG GGGTGGCCCT GCAGCAGATG GGGGAGCGGG ACCAGGGCGC GGCATGCTAC
GGTGAGGCGC TCCGCATCGA TTCCCGGTTC CAGGAGGCGC GGGTGAACCT CGCCCTGCTC
CTCAAGGAAG GGATGAGGCT TGCCGAGGCT GAGGCGCTTC TGTCCCAGGG GATCGCGCTG
GAGCCCGAAT CGGTGCGGCT TCGTTACAAC TACGCCAACG TGCTCCATTA CCAGGGGAGA
AGCCTGGAGG CGACCGGCGC CTACCGGGAG GTGCTCCGCC TGGACCCGCA GCACCTGGAT
GCACGGCAGA ACCTACTGTT CACGCTGCAC TACTCTCCGC AGTTCTCCGA CCGGCAGATC
TTCGCCGAGC ACCTGCGCGC CGCGAGAAGC GCCCCCCTCC GCCTCCCCTC CTCCCCTTCC
GTCCCGCGCC GAGGCAGGCG CATCAGGATC GGCTACCTCT CCCCCGACTT CCGCAGCCAC
GCCGTCGCCT CCTTCATCGA GCCGGTCTTG AAGAAACACG ACCGGGAACG CTTCGAGATC
TTCTGCTACG CGAACCTTCC CCGCCCGGAC CGGGTCACCG AGAGGATAAA GGGGTTGTGC
GAGCACTGGC GCGACCTGTA CAACATACCG GACCAGATCG CGGCACTGAT GATCGCCGCC
GACGCCCTCG ACGTCCTGAT CGACCTAGCC GGCCACACCT CGGGGAACCG GCTCCCGCTT
TTCGCCCGCA AGCCCGCTCC CCTGCAGATC ACCTGGATCG GCTACCCAGA CACCACGGGG
CTCAAGCAGA TGGACTACCG GATCACCGAC CGCCACGCCG ACCCTCCCGG GAAAAGCGAG
CGCTACCACA CCGAAGCACT GCTCAGGCTC CCGCGCAGCT TCAGCTGCTT CCTCCCGCCG
GCAGACGCCC CCGAAGTGGC GCCTCCCCCG TGTCTTGCCA CAGGCGCCGT CACCTTCGGC
TCGTTCAACA ACCTGGCCAA GGTCACCCCC GAGGTGATCG CCCTCTGGTG CCGGGTGCTC
CATGCCGTCC CAGGATCGCG CCTGCTCTTG AAGGGGAGGC CGTTCGAGGA CAGCGGGGTG
CGGGAGAGGA TCGCCTCACA GTTCTCCACG GGAGGGATAG GGGGTGAAAG AATCGAGCTG
AACCCGGGAG AGCCGGAGAG CTCGGCGCAC CTGGCGCAGT ACGGGCGGGT CGACATCGCC
CTCGACACCT TCCCCTACAA CGGCACCACT ACCACCTGCG AGGCGCTCTG GATGGGCGTC
CCGGTGGTGA CTCTGGCGGG TACGAGGCAC GCGGCGCGGA CCGGGGCGAG CATCCTCGCC
AACTGCGGGC TCGACGAGCT GGTGGCCGAG AACGAGGAGG AATACCTGGA GATCGCCCGG
CGGATGGCGG CGGATCGGGA AAGGCTTTTG GAGTTGAGGA TGGGGGCGCG GGAAAGGCTC
TCGGCATCGC CGCTTCTGGA CGCGGCGGGG GTGACGCGGG AGTTGGAAGC GGCGCTGGAG
GGGATCCTCA AGGAGCGCGG GGTACGTTAG
 
Protein sequence
MGYQESAENQ ARLKYVELLL KKGMQEEART QLQQLVQEDP GCARGWYLLA VLVGEQGFPD 
QAAKLLRQAL RAEPENVKAL NALGVALQQM GERDQGAACY GEALRIDSRF QEARVNLALL
LKEGMRLAEA EALLSQGIAL EPESVRLRYN YANVLHYQGR SLEATGAYRE VLRLDPQHLD
ARQNLLFTLH YSPQFSDRQI FAEHLRAARS APLRLPSSPS VPRRGRRIRI GYLSPDFRSH
AVASFIEPVL KKHDRERFEI FCYANLPRPD RVTERIKGLC EHWRDLYNIP DQIAALMIAA
DALDVLIDLA GHTSGNRLPL FARKPAPLQI TWIGYPDTTG LKQMDYRITD RHADPPGKSE
RYHTEALLRL PRSFSCFLPP ADAPEVAPPP CLATGAVTFG SFNNLAKVTP EVIALWCRVL
HAVPGSRLLL KGRPFEDSGV RERIASQFST GGIGGERIEL NPGEPESSAH LAQYGRVDIA
LDTFPYNGTT TTCEALWMGV PVVTLAGTRH AARTGASILA NCGLDELVAE NEEEYLEIAR
RMAADRERLL ELRMGARERL SASPLLDAAG VTRELEAALE GILKERGVR