Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3742 |
Symbol | |
ID | 6780606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 4275990 |
End bp | 4277759 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642769737 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_002140530 |
Protein GI | 197120103 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTTACC AGGAAAGCGC AGAGAACCAG GCGCGGCTCA AGTACGTGGA GCTGCTGCTC AAGAAGGGGA TGCAGGAGGA AGCCCGCACC CAACTGCAGC AGCTGGTGCA GGAAGATCCA GGCTGCGCGC GGGGCTGGTA CCTCCTCGCC GTGCTGGTGG GGGAGCAGGG GTTCCCGGAC CAGGCGGCGA AGCTACTGAG GCAGGCGCTT AGGGCCGAGC CGGAGAACGT CAAGGCGCTG AACGCCCTCG GGGTGGCCCT GCAGCAGATG GGGGAGCGGG ACCAGGGCGC GGCATGCTAC GGTGAGGCGC TCCGCATCGA TTCCCGGTTC CAGGAGGCGC GGGTGAACCT CGCCCTGCTC CTCAAGGAAG GGATGAGGCT TGCCGAGGCT GAGGCGCTTC TGTCCCAGGG GATCGCGCTG GAGCCCGAAT CGGTGCGGCT TCGTTACAAC TACGCCAACG TGCTCCATTA CCAGGGGAGA AGCCTGGAGG CGACCGGCGC CTACCGGGAG GTGCTCCGCC TGGACCCGCA GCACCTGGAT GCACGGCAGA ACCTACTGTT CACGCTGCAC TACTCTCCGC AGTTCTCCGA CCGGCAGATC TTCGCCGAGC ACCTGCGCGC CGCGAGAAGC GCCCCCCTCC GCCTCCCCTC CTCCCCTTCC GTCCCGCGCC GAGGCAGGCG CATCAGGATC GGCTACCTCT CCCCCGACTT CCGCAGCCAC GCCGTCGCCT CCTTCATCGA GCCGGTCTTG AAGAAACACG ACCGGGAACG CTTCGAGATC TTCTGCTACG CGAACCTTCC CCGCCCGGAC CGGGTCACCG AGAGGATAAA GGGGTTGTGC GAGCACTGGC GCGACCTGTA CAACATACCG GACCAGATCG CGGCACTGAT GATCGCCGCC GACGCCCTCG ACGTCCTGAT CGACCTAGCC GGCCACACCT CGGGGAACCG GCTCCCGCTT TTCGCCCGCA AGCCCGCTCC CCTGCAGATC ACCTGGATCG GCTACCCAGA CACCACGGGG CTCAAGCAGA TGGACTACCG GATCACCGAC CGCCACGCCG ACCCTCCCGG GAAAAGCGAG CGCTACCACA CCGAAGCACT GCTCAGGCTC CCGCGCAGCT TCAGCTGCTT CCTCCCGCCG GCAGACGCCC CCGAAGTGGC GCCTCCCCCG TGTCTTGCCA CAGGCGCCGT CACCTTCGGC TCGTTCAACA ACCTGGCCAA GGTCACCCCC GAGGTGATCG CCCTCTGGTG CCGGGTGCTC CATGCCGTCC CAGGATCGCG CCTGCTCTTG AAGGGGAGGC CGTTCGAGGA CAGCGGGGTG CGGGAGAGGA TCGCCTCACA GTTCTCCACG GGAGGGATAG GGGGTGAAAG AATCGAGCTG AACCCGGGAG AGCCGGAGAG CTCGGCGCAC CTGGCGCAGT ACGGGCGGGT CGACATCGCC CTCGACACCT TCCCCTACAA CGGCACCACT ACCACCTGCG AGGCGCTCTG GATGGGCGTC CCGGTGGTGA CTCTGGCGGG TACGAGGCAC GCGGCGCGGA CCGGGGCGAG CATCCTCGCC AACTGCGGGC TCGACGAGCT GGTGGCCGAG AACGAGGAGG AATACCTGGA GATCGCCCGG CGGATGGCGG CGGATCGGGA AAGGCTTTTG GAGTTGAGGA TGGGGGCGCG GGAAAGGCTC TCGGCATCGC CGCTTCTGGA CGCGGCGGGG GTGACGCGGG AGTTGGAAGC GGCGCTGGAG GGGATCCTCA AGGAGCGCGG GGTACGTTAG
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Protein sequence | MGYQESAENQ ARLKYVELLL KKGMQEEART QLQQLVQEDP GCARGWYLLA VLVGEQGFPD QAAKLLRQAL RAEPENVKAL NALGVALQQM GERDQGAACY GEALRIDSRF QEARVNLALL LKEGMRLAEA EALLSQGIAL EPESVRLRYN YANVLHYQGR SLEATGAYRE VLRLDPQHLD ARQNLLFTLH YSPQFSDRQI FAEHLRAARS APLRLPSSPS VPRRGRRIRI GYLSPDFRSH AVASFIEPVL KKHDRERFEI FCYANLPRPD RVTERIKGLC EHWRDLYNIP DQIAALMIAA DALDVLIDLA GHTSGNRLPL FARKPAPLQI TWIGYPDTTG LKQMDYRITD RHADPPGKSE RYHTEALLRL PRSFSCFLPP ADAPEVAPPP CLATGAVTFG SFNNLAKVTP EVIALWCRVL HAVPGSRLLL KGRPFEDSGV RERIASQFST GGIGGERIEL NPGEPESSAH LAQYGRVDIA LDTFPYNGTT TTCEALWMGV PVVTLAGTRH AARTGASILA NCGLDELVAE NEEEYLEIAR RMAADRERLL ELRMGARERL SASPLLDAAG VTRELEAALE GILKERGVR
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