Gene Gbem_3741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3741 
Symbol 
ID6780605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4272667 
End bp4275987 
Gene Length3321 bp 
Protein Length1106 aa 
Translation table11 
GC content69% 
IMG OID642769736 
ProductTPR repeat-containing protein 
Protein accessionYP_002140529 
Protein GI197120102 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGCGC CCGAGAGCGC ACGCGAGCTT TTCCTGGCGG GGAACGCGCT TTTCGGCGCG 
GGGGACCTCT CCGGCGCGTC GGAGTGCTAC CGGCGCGCCC TGCAGCTCGA TCCCGGCTAC
GCCGAGGCGT GCTTCAACCT GGGGTGCACC CTGGACCGCC TGTCCGGCCC CGCCGAGGCG
CTGCCCCACT TAGCGCGCGC CGTCGAGCTG TCGCCTGAGT GGAGCCGGGC CCGCGGCAGC
CTGGGTTTCG CCCTGGCCCG TCTCGGCCGC ATGGGGGAGG CAGCCTCGGA ATTGGCCGCA
GCCGTCCGGC TCGACCCCGG CGACCCCGGG CTCTCGAACA ACCTGGGGCT CGCCCTCTCG
GCGCTTTCCC GGGGCGAGGA GGCGAAGGAC GCCTTCGAGG AGGCGATCCG CCTCGACCCG
CTCTACGCCG AGCCCCACAA CAACCTCTCC ATCCTCTTCG AGCGTTTCGG GGAGAGCGCG
CACGCCATAG CGGCCGCCCT TGAGGCGCTC CGGCTGAAGC CGGAATTCCC CGAGGCGCAC
CTGAACCTCG CCAACGCCCT CAAGTCCCAG GGGAGGCATC AGGAGGCGAT CGCCCACTAC
CGTGAGGCGC TGAGGCTTCG CCCCGACTAC CCCGAAGCGG AAAGCTCGCT TCTCTTCGCG
CTTCTTTACC CCGCACACAC CCCCGAGGAG GAGCTCTTCG CCGAGCACGC AGCCTTCGGG
GCCCGCTGCC GCTTCGCAGC ACCCAGGCAC CTGAACGACC CGGACCCGGA GCGCCCGCTG
AAGCTCGGCT ATCTCTCCGC CGACTTCCGG GAGCACGCCG TGGCCCGCTT CATCGAGCCG
GTCTTGGCCC GCCACGACCG GGCCCTGTTC CAGGTCTATT GCTACTCGAA CGTCCCGGTC
CCGGACCAAA GAAGCGAGAA GCTGGCCTCC ATGGCCGACT GTTTCCGGAA CATAGCCGGG
ATGACGGACC AAAAGGTCGA GGAGCTGGTG CGCGCGGACG GGATCGACAT CCTGGTGGAC
CTCTCCGGGC ACAGCGCGGG AAACCGCCTT CCCGTCTTCG CCCGCAGGCC CGCGCCGGTA
CAGGTCACCT GGCTCGGCTA CCCCTTCAGC ACCGGGCTCG ATGCCATCGA TTACCGCATC
ACCGACGCCG TCTGCGACCC CCCGGGCGAG ACCGAGCGCT ACCACAGCGA GGAGCTCTTG
CGGCTTCCCG GAACCTTCTC CTGCTTTCTC CCCCCCGATG ATGCGCCCCC CCCGGGGCCG
GCGCCCTGCA TCACCAGCGG CAGGGTCACC TTCGGCTCCT TCAACAACCC GGCGAAGATC
ACCCCGGAGA CGGTGCTCCT TTGGTCCGGG GTGCTGCGCG CGGTCCCGGG CTCCCAACTC
CTCTTGAAGG GGTATTCGCT CGCCTGCGCC GAGACGAGGC TGCGCCTGGA GGAGACCTTC
GCCGGGCACG GCATCGAACG CGAACGGCTG GAGCTTCTGG GTAACACCCC CTCCTATCGG
GACCACCTGT CGCTCTACGA CCGGGTCGAC ATCGCCCTGG ACAGCTACCC CTACAACGGC
ACGACTACCA CCTGCGAGGC GCTCTGGATG GGGGTCCCGG TGGTGACGCT GGCGGGCTCC
GCCCACCGCT CGCGTGTGGG TGCCAGCATT TTGCAGGCGC TGGGGCTTGA GGGGCTGGTG
GCGCACGAGG CGCGCAAGTT CGTGGTACTC GCCCAGGCTT TGGCCGGGGA CCGGGAGAGG
CTCTCCGGCC TGCGGACCAC GCTGCGGCAG ACCATGGCCG CCTCCCCCCT CACCGACGGC
GCCTCCTTCA CCCGCCATCT GGAAAAGGCC TGGCGCGACA TCTGGGGGAG GTGGTGCCGC
AGCCATCCGG CCCAGGCGCC GGACCCCGCG GTGCAGGGGG CGCAGTACCT GCAGCACGGC
AGGCTCGACC GGGCGCTCTC GCAGTTCCTG ATACCTTTGC GCGGCGGGGA GAGGAGCACC
CTCGGGGGTA TTCAGGAGGC GCTCCGCCTG CAGCTGGCGG CGGACCAGGC GCGCGCGCTG
GCACTAGACG ACCCGCTGGC CTTCCGGGAG GAGGAGCCGG AGCATTTGGG CAGCGAGACC
CTGGCCGAGA CGGCCGAACT TCTGGTTGCC GCCGGCTTTG TGACGCCGGC AGAGCTCATC
TGCCGCTACC TGGGCGACCG CGGCTGCCTG AGCCCCCGGG TGAGCCGCAC CTTGGCCGAG
GTGGCGCTCG CCATTGGGAA GCCTGAAGTC GCGGTACGCG AATTCGAACA CGCCCAGGCT
GCAGGTGACC GCTCCCGCGC CACCCGCATC AAGCTGGTGA AGGCGCAGGA GGCGGAGCGG
CTCTCCCCAC CTCCGGAGAG AGGGGAGCGC TTTCTTCTCA TCAAGGCCTG GGGATACGGT
TTCTGGAGCG ACGTGAACAT GCTCTTGGGG CAGTGCCTCT TGGCGGAGAT CACCGGGCGG
GTCCCGGTGG TGCACTGGGG GGGAAATTCA CTTTTCTCCG ACGATCCCGG GAAAAACGCC
TTTCTGAGCT TCTTCCTCCC CTTCAACGGC ACCGGCATCG GCGAGCTCGC CGCCCGCGCG
CGGAGCTTCT ATCCCCCCAA GTGGAACCGG GAGAACCTCC TTTTGGACGA GCTCAACAAG
GAGGAGGGGC CCTGGTCCCG CTTTTCCTCC CTCTACGCCC TGGAGCGCGG CGAGGAGGTG
GTGGTAGGGG ATTTCCATTA CGGCGTGAAT GATCTCATCC CCTGGATCCC GCCGGAGCAC
CCGCTTTACG GGCTCGACCA GGACGCGCTC TGCCTGCAGC TTTACCGGCG CTACCTAAGG
CCTAAGCCTG AGCTGGAGCA GCGCGCCGAG GCCTTCTTCA ACCGGGAGTT CTCAGGCCGC
CCCGTGCTGG CGCTCCACGT CCGCGGCGGG GACAAGGGGG GAGAAGATCC CGGCCTTCAC
CGGCTGAACG CCCTCTATCA CCCACGGATC GAGCGCTTCC TTAGCGAGGA GCGGGAGGGG
CGCCTTTTCC TTCTCACCGA CGACGAGAAG CTCCTCTCCT CCTACAGGGA GCGCTACGGG
GACCGACTCT CCCACACCGT CTCGACCCGC ACCGGCTCCA GCCTCGGGGT GCATTACCAG
GAGCAGGCGG ACCGCAGGGC GCTGGGCGAG GAAGTGCTAG TCGACGCGCT GATTGCCTCG
CGCTGCCACC TTTTCCTCGG CAACGGCTTT TCCAACGTCT CCCTGGCGGT GGCCCAGATG
AAGCAGTGGG AGCCGGGGAG CTGCGTCCTT TTTGGCGCCC GGCTGGACCG GGTCCGGCAG
ATGACCCTCT ACAGGAGCTG A
 
Protein sequence
MTAPESAREL FLAGNALFGA GDLSGASECY RRALQLDPGY AEACFNLGCT LDRLSGPAEA 
LPHLARAVEL SPEWSRARGS LGFALARLGR MGEAASELAA AVRLDPGDPG LSNNLGLALS
ALSRGEEAKD AFEEAIRLDP LYAEPHNNLS ILFERFGESA HAIAAALEAL RLKPEFPEAH
LNLANALKSQ GRHQEAIAHY REALRLRPDY PEAESSLLFA LLYPAHTPEE ELFAEHAAFG
ARCRFAAPRH LNDPDPERPL KLGYLSADFR EHAVARFIEP VLARHDRALF QVYCYSNVPV
PDQRSEKLAS MADCFRNIAG MTDQKVEELV RADGIDILVD LSGHSAGNRL PVFARRPAPV
QVTWLGYPFS TGLDAIDYRI TDAVCDPPGE TERYHSEELL RLPGTFSCFL PPDDAPPPGP
APCITSGRVT FGSFNNPAKI TPETVLLWSG VLRAVPGSQL LLKGYSLACA ETRLRLEETF
AGHGIERERL ELLGNTPSYR DHLSLYDRVD IALDSYPYNG TTTTCEALWM GVPVVTLAGS
AHRSRVGASI LQALGLEGLV AHEARKFVVL AQALAGDRER LSGLRTTLRQ TMAASPLTDG
ASFTRHLEKA WRDIWGRWCR SHPAQAPDPA VQGAQYLQHG RLDRALSQFL IPLRGGERST
LGGIQEALRL QLAADQARAL ALDDPLAFRE EEPEHLGSET LAETAELLVA AGFVTPAELI
CRYLGDRGCL SPRVSRTLAE VALAIGKPEV AVREFEHAQA AGDRSRATRI KLVKAQEAER
LSPPPERGER FLLIKAWGYG FWSDVNMLLG QCLLAEITGR VPVVHWGGNS LFSDDPGKNA
FLSFFLPFNG TGIGELAARA RSFYPPKWNR ENLLLDELNK EEGPWSRFSS LYALERGEEV
VVGDFHYGVN DLIPWIPPEH PLYGLDQDAL CLQLYRRYLR PKPELEQRAE AFFNREFSGR
PVLALHVRGG DKGGEDPGLH RLNALYHPRI ERFLSEEREG RLFLLTDDEK LLSSYRERYG
DRLSHTVSTR TGSSLGVHYQ EQADRRALGE EVLVDALIAS RCHLFLGNGF SNVSLAVAQM
KQWEPGSCVL FGARLDRVRQ MTLYRS