| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3725 |
|---|
| Symbol | |
|---|
| ID | 6780589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 4252477 |
|---|
| End bp | 4253343 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642769720 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_002140513 |
|---|
| Protein GI | 197120086 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGC ACAACGCCCA GAAGCAGGTC CTCGTCACCG GCGCCACCGG CTTCATCGGC
CGGCACGCCG TCTCTCTCCT GGAGAGCCGC GGCATCGCGA CCCACAGCTG CGCCCGCTCC
ACCGGCTGCG ACCTCGAACA AAACGGCGCC CTCGCCCCCT TCCAGGGGCG GGGGATCACC
CACGTCATCC ACCTTGGGGG GCGCACCTTC GTCCCTCACA GCTGGGAAGA CCCGGGGGCC
TTCTACCGCG CCAACACGCT CGGGACCCAG CAGCTGCTCG ATTTCTGCCG CATAAGCGGC
GCAAGGCTCG TGTACGTCAG CGCCTACGTC TACGGCGTGC CGCACACCCT CCCCATCGCA
GAATCGCACC CGGTAGCCCC GAACACCCCC TACAACCACT CGAAATGGCT CGCGGAAGAG
CTCTGCCGCT TCTACGCCGA TCACTTCGAG GTCCCGGTCA CCGTGCTGCG CCCCTTCAAC
ATCTTCGGCC CCGGCCAGGG GGAGGATTTC CTGATCCCGA CCATCCTGAA GCAGGCCAAA
AGCGGCGGGA CGATCACGGT GAAGGACGCG GCACCCAGGC GCGACTACCT CCACGTGGAC
GACCTCGCCG AGGCGCTGCT CCTGGCCCTC GACCTGGAGC CCCGCTTCTC GCTCTTCAAC
GTCGGCTCGG GACGGTCGAT CTCGGTGGGG GAGCTTTTGG ACATGGCGGT CCGCTACTCC
CCGCGCCCGC TCTGCTGGCA AGCGACGGGC GAGATCCGGG TGAACGAGGT CCCCGACACC
GTCGCCGACA TTTCGGCCAT CACCAGGGCG CTCGGCTGGC TTCCCAGGCG CACCCTGGAG
CAATTCCTGA AATCGGAGCT CGCATGA
|
|---|
| Protein sequence | MTVHNAQKQV LVTGATGFIG RHAVSLLESR GIATHSCARS TGCDLEQNGA LAPFQGRGIT
HVIHLGGRTF VPHSWEDPGA FYRANTLGTQ QLLDFCRISG ARLVYVSAYV YGVPHTLPIA
ESHPVAPNTP YNHSKWLAEE LCRFYADHFE VPVTVLRPFN IFGPGQGEDF LIPTILKQAK
SGGTITVKDA APRRDYLHVD DLAEALLLAL DLEPRFSLFN VGSGRSISVG ELLDMAVRYS
PRPLCWQATG EIRVNEVPDT VADISAITRA LGWLPRRTLE QFLKSELA
|
|---|
| |