| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3719 |
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| Symbol | |
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| ID | 6780583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 4244134 |
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| End bp | 4245351 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642769714 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002140507 |
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| Protein GI | 197120080 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACGC AGAGAACGGC ATGGGACTAC ATGGACGACA TGTTCAGCAC CCTCGCCTCG
CAGGACTCAC AGCGGGCGCA GCTGGCCAAC GGAGCCTTGA GCTCGGGCCT TGGGTACTAC
CAGAAGAAGG ATTACGCCCG CGCCACGGGC GAGCTGAAGC GCGCCATCTC CATGGACCCC
ACCAACACCC AGGCCTACAA GTTCCTGGCC AGCGCGTATC AGGCACAGGG GAAGACCGAC
GAGGCGATCA AGACCTACAA GAACTCGCTG GCGCTCGACC CGACCCAGGA CTCCATACAC
ACGAACCTCG GCAACATCTA CCTGCAGCAG AAGAAGTACA ACCTGGCCGA GAGGGAGTTC
AAGGACGCCG CCAAGCTGAA CCCCACCGAC ACCCTCGCCC CCTATACGCT CGGGCAGCTC
TACGTGCAGA CCGAACGCTA CGGCGAGGCG GAGACCCAGT TCAAGAAGGT CTCCAGGATG
GCCCCCACCG ACCCTAACCC TTACTATTCC CTAGGCGCGG TCTACAACAA GGAAGGGAAA
TACGCCGACG CGGTGAAGCA GCTTACGCAG GCCGTGAAAC TGCGCCCCAA GATGGAGGCG
GCGCATTTCG AACTGGGCGT CGCCTATGCC GCCTTGGGCG ACACCACCAA CGCACAGAAA
GAGGTCAACA CCCTCACCAC GCTGAACTCG ACTCAAGGGG CCCTGCTCAA GCTGACCATC
GCCCAGCCGC AGATGATCGC GGCCGGCGGC GAGGACGACA CCTTCCTGCC GGCCAAGCAG
ACCCCGAGCA CCAACCCCCA GCCGGGCGAC AACCCATACC TGCTGAGCCT GCTGGACGTA
GTCGACCTAT CGGCGGCGAA CTCCTCGAAG GTGCTCAGCA TGACCTTCTA CTTCGACTCC
GCCATGGACG CCGCTTCCGT GCAGGACACC AGCAACTGGA CCATCACCAA GGCGACGGGC
GGGGCGGCCG GGTACTACAA CAACCTGCTG CCGATACTCC CCACAGAGGC GTACATCCCG
CAAAACCCGC TCAGCGTGAC CTACGACCCC GAGAAGCGGA CCGCGACGGT CAACTTCATG
CTGAGCCAGA ACGACACCGG CGACGCGACC ATCGACTCCG CGCACATGGT TTTCAAGTTC
TCCGGCACCG ACGCCAGGGG GAAGGTCATG GACCCTGCAG CCGACGAGTT CGACGCCGCG
GCGGAAGGGC CTTTCTGA
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| Protein sequence | MATQRTAWDY MDDMFSTLAS QDSQRAQLAN GALSSGLGYY QKKDYARATG ELKRAISMDP
TNTQAYKFLA SAYQAQGKTD EAIKTYKNSL ALDPTQDSIH TNLGNIYLQQ KKYNLAEREF
KDAAKLNPTD TLAPYTLGQL YVQTERYGEA ETQFKKVSRM APTDPNPYYS LGAVYNKEGK
YADAVKQLTQ AVKLRPKMEA AHFELGVAYA ALGDTTNAQK EVNTLTTLNS TQGALLKLTI
AQPQMIAAGG EDDTFLPAKQ TPSTNPQPGD NPYLLSLLDV VDLSAANSSK VLSMTFYFDS
AMDAASVQDT SNWTITKATG GAAGYYNNLL PILPTEAYIP QNPLSVTYDP EKRTATVNFM
LSQNDTGDAT IDSAHMVFKF SGTDARGKVM DPAADEFDAA AEGPF
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