| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3661 |
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| Symbol | |
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| ID | 6780525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4190035 |
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| End bp | 4191465 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642769656 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_002140449 |
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| Protein GI | 197120022 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCA AGAAGATTCC GGTAGCAACT GCTTTCTTTT TAGGGAGCCT TTTACTTTCT
TCCGGAGCGG CTTTCGCGCT GCATCCGGAC CTGGTGGTTC CGGAGAGGGT GGAACTGAAG
CACAAGGCCT GCCAGGACAT TGTGCGGCTC GGAGCGAAGT ACAAGGTGGA GGGGCTCTTC
ACTCCGGAGT TCCTGGAGGG AAAGCAGCAC GACTGCAGCC GGATCGATGT CGCGCTGGCG
GTGCAGCTTT TGACCGAGAA AATGGCGGAA AAAGCGGTGA AGGAGGGGAA CCAGGCCGTG
GACAGGGAAG ACCTGCTGCT GCTCGCGGAC CTGAAGGAGG AACTGCGCGC CGAGATGCTG
CTGGTCGGTA CCAGGACCTT CGAGTCCCGT TACCAGGACC TGGGCACCAG GTTCACCGCG
CTCACCAAGA ACATCTCCCT TAGCGGCGGC ATGGTCGGCG TGCTCCAGGG GACCGTCGGC
CACAGCCCCA AAGATCACGC CGATACCGTG GGACGCGCCG ATCTGGTCTT CAACTTCAAG
GTGGGGGAGA ACACCATCGC CGTCCTCGAC CTCGAAGCGA CCGGCGGCGA AGGGATCGAC
AAGACCGCTC GCATGAACTC GTTCTCGGGC CTGAACGGCC TGGCCGGATC CACCGGCGAC
CGGGTCAGAT TCCGCGAGGC GTGGGTCGAG CATTCGGCCT TCGACGACCG GATGGTGCTG
ACCGCCGGCA AGGTCGACCT TTCCAACTAC TTCGATTCCA ACGCGGTCGC CAACGACGAG
ACCGGGCAGT TCCTGGCCGG CGCCTTCGTC CACTCCGCCG TGCTCCCTTT CCCTGCTAAC
GGGCCCGGCG CAAGGGTGGC CGCGAAACTG ACCGATTCCC TCGTCGTAGG CCTTGGCTAT
GGCAGCGGCG ATGCGGGCAG CGAAGACAGC TCCGACTCAG CCGACATCTT CAGCCACGGC
TTTGGCATCG CGGAACTCGA TTACAAGGTG AAGGCAGGGA ATCTGGAAGG GAACTACCGT
CTCTATGCGG CCTTGGACGG AGCAGTCGCC GGCAAGTTGG AGCAGAAAAA CGCCTGGAAC
TTCGGCGCGA GCCTCGACCA GCAGCTGACC GACAAGCTGA CCCTCTTCGC CCGCTACGGC
CAGCGCGACA AGGATGTCTA CGAGGTCCAG CAGGCCTGGA GCGCCGGCGG GCAGTACGTC
GGGCTTTTCC CCTCCAGGAA GAACGACGTT CTCGGCGTAG CCTACGGCCA GATCAAGGCG
CACAGCTCCA TCGCCGATAC CCAGGAGAAG CTGACCGAGG TCTACTACAA GTTCAAGGTA
AACGACCAGA TCGAGATCGC GCCGGTGGCG CAGTACCTGG TCCACCCGGC CGGCGTGCGC
GGCAACGACG ACGTGCTGGC GCTGGCGCTG CGCGCCCGGA TCAGCTTCTG A
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| Protein sequence | MNFKKIPVAT AFFLGSLLLS SGAAFALHPD LVVPERVELK HKACQDIVRL GAKYKVEGLF
TPEFLEGKQH DCSRIDVALA VQLLTEKMAE KAVKEGNQAV DREDLLLLAD LKEELRAEML
LVGTRTFESR YQDLGTRFTA LTKNISLSGG MVGVLQGTVG HSPKDHADTV GRADLVFNFK
VGENTIAVLD LEATGGEGID KTARMNSFSG LNGLAGSTGD RVRFREAWVE HSAFDDRMVL
TAGKVDLSNY FDSNAVANDE TGQFLAGAFV HSAVLPFPAN GPGARVAAKL TDSLVVGLGY
GSGDAGSEDS SDSADIFSHG FGIAELDYKV KAGNLEGNYR LYAALDGAVA GKLEQKNAWN
FGASLDQQLT DKLTLFARYG QRDKDVYEVQ QAWSAGGQYV GLFPSRKNDV LGVAYGQIKA
HSSIADTQEK LTEVYYKFKV NDQIEIAPVA QYLVHPAGVR GNDDVLALAL RARISF
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