Gene Gbem_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3616 
Symbol 
ID6780480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4134840 
End bp4136309 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content66% 
IMG OID642769611 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_002140404 
Protein GI197119977 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCGA CGAGACCGCC TGAACCCCGC CGCTCCACCT CCATCACCGC GCGCCTGGTC 
GCCTTCTACC TGATCAGCAC CCTTTTGATA CTCCTTTGCA CCAACTGGTT CCAGTTCAAG
GCGCTCTCCA AGGACCTCAA CTACGAGGAC AACGATTTCG TGCTGGAAAG GATCAACTCG
CTGCGCGACA TCGTGGCCCG GCACCCGGAC GCGCTGAGGG ACCAGATACC GATCGACAGG
CCGGGGCAGC CCGTGCGGCA CCTGGTTCGG ATCCAGGACG CGGAGGGGCG CACCCTGCTG
GAGTCGCCGC AGATGTCGGA GTTGGCGGTG GGGCTTTTCC CGCCGGCGGT GACCGCGCAG
GAAAACATCG GCCGCAGCGC CAAGTACCGC GCGTCCAATC ACAGGCGCTA CCTCCTGAAC
GCTGCCTGGG CCGGGAAGGA GGGCGATCCG CACTTCCGGC TGTTGCAGGT GGCGCTGGAC
ATAACCAATG AAGACGCCCT GATTTCCAAG TACCTGCTGC GTACCGTGGC CGCGGTGGCC
ATAGGGCTGC TGCTCGCTGC GGGGCTCGGG GTCCTCATCG CCCGCCGGGG CTTGAGGCCG
CTGCAGGAGA TGGCGGCAAA GGTGGCCCGG ATCACCGAGG CCGACCTGCA CCAACGGGTC
GGGACGACGA CGAGCTGGCC TAACGAGCTG GACCAGTTGA CCGCGGCTCT CGACGCCATG
CTGGCCCGGC TGGAGGAATC CTTCGCACGG CTGTCGGAGT TTTCAGCAAA CCTGGCCCAC
GAGCTGCGCA CGCCGATCAA CAACCTGCGC GGCGAAGCCG AGGTCGCGCT GTCCCGGGCA
CGCTCCGAAG AGGAATACCG TCGCATCATC GAGTCGAGCA TCGAGGAGTA CGAGCGGCTG
GCCCGCATGG TGGGGGACAT CCTGTTCCTG GCCCGGCCGG ACCGCGCCCA CGAAAAGCGC
CTGATCGACG CGAGGCAGGC CTTGGAAACG CTGGCGGAGT ACTACAGCAA CGTTGCGGAG
GAGCAGCAGA CTTCCATCTC GGTGGAGGGG AGCGGCGACA TCTGCGTAGA CCCCAACCTG
TTCCAACGCG CCGTGGGGAA CCTCATCTCG AACGCGCTGC ACTACACCCC GAAGTCCGGG
CGCATCTCCC TGAAGATCGA CCATAAGGAG GACGGCTCGG TCGCCATCTC CGTCGCCGAC
AACGGCATGG GGGTGGACGA AGCGGAGCTG CCGCGCGTCT TCGATCGCTT CTACCGCTCG
CCGCAGGCCC GCCTGGTGTA CAACCAGGGG AGCGGTCTCG GGCTCGCCAT CGTCCGTTCC
ATCATGACCC TGCATGGCGG CAGCGTCTCT GTCGCCAGCG CTCCCGGGAT AGGGACCACC
GTCACCCTCA GTTTTGCACC TCCCCCGCCG GGTGCAGTTG CAGAACAAGT CCCCCCCTCC
CTTGACGGGA GGGGGACGGG GGGGGGGTGA
 
Protein sequence
MSSTRPPEPR RSTSITARLV AFYLISTLLI LLCTNWFQFK ALSKDLNYED NDFVLERINS 
LRDIVARHPD ALRDQIPIDR PGQPVRHLVR IQDAEGRTLL ESPQMSELAV GLFPPAVTAQ
ENIGRSAKYR ASNHRRYLLN AAWAGKEGDP HFRLLQVALD ITNEDALISK YLLRTVAAVA
IGLLLAAGLG VLIARRGLRP LQEMAAKVAR ITEADLHQRV GTTTSWPNEL DQLTAALDAM
LARLEESFAR LSEFSANLAH ELRTPINNLR GEAEVALSRA RSEEEYRRII ESSIEEYERL
ARMVGDILFL ARPDRAHEKR LIDARQALET LAEYYSNVAE EQQTSISVEG SGDICVDPNL
FQRAVGNLIS NALHYTPKSG RISLKIDHKE DGSVAISVAD NGMGVDEAEL PRVFDRFYRS
PQARLVYNQG SGLGLAIVRS IMTLHGGSVS VASAPGIGTT VTLSFAPPPP GAVAEQVPPS
LDGRGTGGG