| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3616 |
|---|
| Symbol | |
|---|
| ID | 6780480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 4134840 |
|---|
| End bp | 4136309 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642769611 |
|---|
| Product | heavy metal sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002140404 |
|---|
| Protein GI | 197119977 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCGA CGAGACCGCC TGAACCCCGC CGCTCCACCT CCATCACCGC GCGCCTGGTC
GCCTTCTACC TGATCAGCAC CCTTTTGATA CTCCTTTGCA CCAACTGGTT CCAGTTCAAG
GCGCTCTCCA AGGACCTCAA CTACGAGGAC AACGATTTCG TGCTGGAAAG GATCAACTCG
CTGCGCGACA TCGTGGCCCG GCACCCGGAC GCGCTGAGGG ACCAGATACC GATCGACAGG
CCGGGGCAGC CCGTGCGGCA CCTGGTTCGG ATCCAGGACG CGGAGGGGCG CACCCTGCTG
GAGTCGCCGC AGATGTCGGA GTTGGCGGTG GGGCTTTTCC CGCCGGCGGT GACCGCGCAG
GAAAACATCG GCCGCAGCGC CAAGTACCGC GCGTCCAATC ACAGGCGCTA CCTCCTGAAC
GCTGCCTGGG CCGGGAAGGA GGGCGATCCG CACTTCCGGC TGTTGCAGGT GGCGCTGGAC
ATAACCAATG AAGACGCCCT GATTTCCAAG TACCTGCTGC GTACCGTGGC CGCGGTGGCC
ATAGGGCTGC TGCTCGCTGC GGGGCTCGGG GTCCTCATCG CCCGCCGGGG CTTGAGGCCG
CTGCAGGAGA TGGCGGCAAA GGTGGCCCGG ATCACCGAGG CCGACCTGCA CCAACGGGTC
GGGACGACGA CGAGCTGGCC TAACGAGCTG GACCAGTTGA CCGCGGCTCT CGACGCCATG
CTGGCCCGGC TGGAGGAATC CTTCGCACGG CTGTCGGAGT TTTCAGCAAA CCTGGCCCAC
GAGCTGCGCA CGCCGATCAA CAACCTGCGC GGCGAAGCCG AGGTCGCGCT GTCCCGGGCA
CGCTCCGAAG AGGAATACCG TCGCATCATC GAGTCGAGCA TCGAGGAGTA CGAGCGGCTG
GCCCGCATGG TGGGGGACAT CCTGTTCCTG GCCCGGCCGG ACCGCGCCCA CGAAAAGCGC
CTGATCGACG CGAGGCAGGC CTTGGAAACG CTGGCGGAGT ACTACAGCAA CGTTGCGGAG
GAGCAGCAGA CTTCCATCTC GGTGGAGGGG AGCGGCGACA TCTGCGTAGA CCCCAACCTG
TTCCAACGCG CCGTGGGGAA CCTCATCTCG AACGCGCTGC ACTACACCCC GAAGTCCGGG
CGCATCTCCC TGAAGATCGA CCATAAGGAG GACGGCTCGG TCGCCATCTC CGTCGCCGAC
AACGGCATGG GGGTGGACGA AGCGGAGCTG CCGCGCGTCT TCGATCGCTT CTACCGCTCG
CCGCAGGCCC GCCTGGTGTA CAACCAGGGG AGCGGTCTCG GGCTCGCCAT CGTCCGTTCC
ATCATGACCC TGCATGGCGG CAGCGTCTCT GTCGCCAGCG CTCCCGGGAT AGGGACCACC
GTCACCCTCA GTTTTGCACC TCCCCCGCCG GGTGCAGTTG CAGAACAAGT CCCCCCCTCC
CTTGACGGGA GGGGGACGGG GGGGGGGTGA
|
|---|
| Protein sequence | MSSTRPPEPR RSTSITARLV AFYLISTLLI LLCTNWFQFK ALSKDLNYED NDFVLERINS
LRDIVARHPD ALRDQIPIDR PGQPVRHLVR IQDAEGRTLL ESPQMSELAV GLFPPAVTAQ
ENIGRSAKYR ASNHRRYLLN AAWAGKEGDP HFRLLQVALD ITNEDALISK YLLRTVAAVA
IGLLLAAGLG VLIARRGLRP LQEMAAKVAR ITEADLHQRV GTTTSWPNEL DQLTAALDAM
LARLEESFAR LSEFSANLAH ELRTPINNLR GEAEVALSRA RSEEEYRRII ESSIEEYERL
ARMVGDILFL ARPDRAHEKR LIDARQALET LAEYYSNVAE EQQTSISVEG SGDICVDPNL
FQRAVGNLIS NALHYTPKSG RISLKIDHKE DGSVAISVAD NGMGVDEAEL PRVFDRFYRS
PQARLVYNQG SGLGLAIVRS IMTLHGGSVS VASAPGIGTT VTLSFAPPPP GAVAEQVPPS
LDGRGTGGG
|
|---|
| |