| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3605 |
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| Symbol | |
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| ID | 6780469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4122974 |
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| End bp | 4123531 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642769600 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002140393 |
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| Protein GI | 197119966 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTACA AAGTTGCCAT GACACTCCTC CTCACCATCT GGTTCTCTTC TTCCGCGCTC
GGATACAGCG AGCCGTCAGC GCAGGATCTG GAACAGGAAT TCAGCCGCTA CAGCGAGCTC
CTAAGAACCG ACGGCAAAAA CCCCCGCTAC CTGAACGGGC TGGGCTTCGC CTGCTACCGT
TTGAACCGGC TCCCCCAGGC CATCGAGGCC TACCAGAAGT CTCTTTCCTA CGACCCGCAA
GCCACCACCT TCAACAACCT CGGCGCGGCC TACCTGCGCC TCAAGCAATT TGAAAACGCC
GAACATGCTT TCCGCAAGGC CCTGGAACTG GATTCCTCCG CGGTAAAGGC GGCTTACAAC
CTGGCCGTCG CCCTTTACCG GGAAGACCGT TTTTACGCAG CCTACCAGGC CTACCGCCAG
GCCAAGCAGA TAGACGCAGA CTACGTGAAG AAACGGTTTG AAGCCTCGAA CGCGCGGGAC
GAACTGCGCA AAGCGGTCCT GCAGATGTCC GACAAAGATG CGTCACGCCT GGCGCTTAGA
CGGCTTGAGG CCGAATAG
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| Protein sequence | MLYKVAMTLL LTIWFSSSAL GYSEPSAQDL EQEFSRYSEL LRTDGKNPRY LNGLGFACYR
LNRLPQAIEA YQKSLSYDPQ ATTFNNLGAA YLRLKQFENA EHAFRKALEL DSSAVKAAYN
LAVALYREDR FYAAYQAYRQ AKQIDADYVK KRFEASNARD ELRKAVLQMS DKDASRLALR
RLEAE
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