| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3596 |
|---|
| Symbol | |
|---|
| ID | 6780460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 4112572 |
|---|
| End bp | 4113825 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642769591 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002140384 |
|---|
| Protein GI | 197119957 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACG CTACAGCAGA GCCGCAACTG TTGCGCGACA GCAATTATCG CATCTTCTGG
ATGGGGCAGA GTGTGTCATG GCTTGGGTGC GTGACGCAGT CGGTCGCCCA GGGGTGGCTG
GTGTGGTCCC TGACAAAGTC TCCGGGGCAG CTTGCGCTGA CCGCAGTCAT GACATCGTTG
CCGGCGCTTC TCTTCAGCCT TCTCGGCGGT GTCATTGCGG ATCGCTTCGA CAAGCGGGTG
CTGCTCATGA CCACACAAGC AGCATCCTTG ATACCCGCCT CCTTGCTGGG TCTTCTGACC
GCTTGCGGTG AGATCACCGT ATCCCAGGTC TTGGCACTCG CGTTTCTCCA GGCGACCTTG
CAAGCCCTGG AGTTGCCGGC ACGACACGCA TTCCTTTCCG AACTGGTCCC AGTTGGCCGG
CTCAGCCAAG CAGTCTCCCT GAACGCAGTC TCCTTCAACG CCACACGCCT GATCGGCCCA
GCGATAGCCG GTTTCACCAT GGCAGCTTTC GGCACGGCCC CTTGCTTCTT CATAAACGCC
TCCAGCTTCC TGGTCGGTAT GCTGTCCCTT CTCTTCGTGC AGTCCGCGGG AGGGGAGAAC
CTTGAAGGCA AAAGGCCGGG GCGCCTTCCG CTTGCCGACC TCTGTGAGGG CTTTCGCTTT
GTGCTGAACG ACAGGGAGGT CCGGCCGCTG CTGCTACAGG TGGCCCTGGT CGGCTTGCTG
GGGATCCCTT TCGTGCCGCT GCTCCCGGTG TTCGCCGATA CGTTGGGAGT CGGAGCTCGG
GGGCTTGGAG TGATGTCGGC CTGTGCCGGT GGCGGGTCGC TGCTCGCCGC AGTGGCATTG
TCGTGGGCGC GGGAGATCCG GGCGCGGAAA GAAGTCGCCG CATCGGCAGC GATGCTATTT
GCGGCAGCCT TGCTGGTATT CTCCCGCTCG GAGCACTATC CCCTGACCTT ATTTGCCTTG
GCCCTGGCAG GAGGGGCTCT GGTGGTATTT CTTGCGCTGG TAAATCGCAC CCTGCAGCAG
AGTTCCCCCG GCCACATGCG TGGAAGAGTC ATGGCCGCCT ACAGCTTGGC GCTCATCGGG
ACCGCCCCGC TGGGAACAGC CCTGGTGGGG GCCCTGGCCG CAATGCTCGG GACTGCCTGG
GCACTCTCCT TTAGTTCCTC TCTTTGTCTT GCCGCCATCG TGCTGAGTCA CTTTCACAGC
GGACGGGGTG CAGGCGAAAC CGGATGCCTC ACAGCGGCTG AGGGCAAACC GTGA
|
|---|
| Protein sequence | MSNATAEPQL LRDSNYRIFW MGQSVSWLGC VTQSVAQGWL VWSLTKSPGQ LALTAVMTSL
PALLFSLLGG VIADRFDKRV LLMTTQAASL IPASLLGLLT ACGEITVSQV LALAFLQATL
QALELPARHA FLSELVPVGR LSQAVSLNAV SFNATRLIGP AIAGFTMAAF GTAPCFFINA
SSFLVGMLSL LFVQSAGGEN LEGKRPGRLP LADLCEGFRF VLNDREVRPL LLQVALVGLL
GIPFVPLLPV FADTLGVGAR GLGVMSACAG GGSLLAAVAL SWAREIRARK EVAASAAMLF
AAALLVFSRS EHYPLTLFAL ALAGGALVVF LALVNRTLQQ SSPGHMRGRV MAAYSLALIG
TAPLGTALVG ALAAMLGTAW ALSFSSSLCL AAIVLSHFHS GRGAGETGCL TAAEGKP
|
|---|
| |