| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3592 |
|---|
| Symbol | |
|---|
| ID | 6780456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 4107625 |
|---|
| End bp | 4108863 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642769587 |
|---|
| Product | PDZ/DHR/GLGF domain protein |
|---|
| Protein accession | YP_002140380 |
|---|
| Protein GI | 197119953 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.713036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTT TTCATTCTCG TCAGTCACTG TTTTTGATCT GTTTTCTGCT GGTCGGTTTG
CTTAATACCG GTTGCTCGGC AATCAAGGGG GTCTCCATGG TTCGGGGCGG CTCGCCTCAG
AGCATCTTGA CCAACGATGA ATCTGTCAAG GCAGAGCAGA TGGCCCATCT TCTCACCGTA
AAGGTCAGAA TCGACGATTC CCCAGAGGAT CTGACTTTCA TGGTGGATAC AGGTGCCCTT
ACCGTCATAG ACGAACAGGT CGCCAAAAGA TTCGCGTTCA AGGACTCGGT GACGAATAAG
GTTGCAGACT CAGCGGGGAA CAAAAAAGAC GTTCGCCTGG TTCAGGTGAA CAGAATAAGC
GTAGGGAAAG CCGCCGTTTC AGACTGCGCA GCTGCTGTTG TCGATATGAA AAAATTCAAC
CCGAAGATCG ACGGCTTGCT CGGTTCCAAT TTTCTCAGGT TTTTTACGGT TCAGCTGGAT
TACCGGAATC AGCGAGTGAC GTTCCTGAGT AAATCCGAAG GACGCTCCTT TGACGGTGCG
ATGAAGTTGC CGATGTGGAA AAACATGAAG TTCGGATTTG CGCCTACCAT GAAATGCGAA
GTAGACGGCT CGGTAGCTCT CGACTGCATG GTCGATACCG GACACGATGC GATCGCCTCT
TTTCCTCTGT CCACCCTCAA CAAGCTGCCT CACTTCAAGA GTGGAGAATA CATCAGCTCC
AACGGCTCGA TGGGAGCAGG AGTATTCGGC AAAGACAGAG AAAGCTACTT GGTCAAAACG
GATCGAATAG CATCAGGCCC CATAACCATA GAGAATGCGG CGATTTTCTC TAACCGCTTC
GAAGATGTTA TGACCCTGGG CGCCGCATAT CTGAAGAATT TCATGGTGAC CATCGATTAC
CCAGCCTCTC TTCTGTACTT GAAGCCGTTC GACGATCGGC ATCTTGAAAA GGAGATGATG
TCTTACGGAT TCGCAGTCTC TTATGAGAAG GGTAAGGCTA TCGTGAGCGG TTTATGGAAA
GGGAGTGCCG CAGACAAAGC TGGATTGTCG GTCGGTGACG AACTTATTGC CTTGAATGGC
CGCGAGACGG CAGGTATGTC TTTGTTCGAC ATGATGCAGA TAACGAAATC GAGCGAGACC
TTGAGTGTTT CCTATATCAA GGGGTCCAGT GGAAATAAAT CCGAATTGAC CCTCCGCAAG
GGGGACTTGA CGCTCCTTTT CCCCAGGTCG CCCAGCTGA
|
|---|
| Protein sequence | MKPFHSRQSL FLICFLLVGL LNTGCSAIKG VSMVRGGSPQ SILTNDESVK AEQMAHLLTV
KVRIDDSPED LTFMVDTGAL TVIDEQVAKR FAFKDSVTNK VADSAGNKKD VRLVQVNRIS
VGKAAVSDCA AAVVDMKKFN PKIDGLLGSN FLRFFTVQLD YRNQRVTFLS KSEGRSFDGA
MKLPMWKNMK FGFAPTMKCE VDGSVALDCM VDTGHDAIAS FPLSTLNKLP HFKSGEYISS
NGSMGAGVFG KDRESYLVKT DRIASGPITI ENAAIFSNRF EDVMTLGAAY LKNFMVTIDY
PASLLYLKPF DDRHLEKEMM SYGFAVSYEK GKAIVSGLWK GSAADKAGLS VGDELIALNG
RETAGMSLFD MMQITKSSET LSVSYIKGSS GNKSELTLRK GDLTLLFPRS PS
|
|---|
| |