Gene Gbem_3555 details

Gene Information

• Locus tag: Gbem_3555
• ID: 6780418
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 4070216
• End bp: 4070896
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642769549
• Product: cyclase family protein
• Protein accession: YP_002140343
• Protein GI: 197119916
• COG category: [R] General function prediction only
• COG ID: [COG1878] Predicted metal-dependent hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAATCC ACGACATTAC CGTTTCCCTC TCCAGCGATC TTCCCATCTA CCCAGGCGAC 
CCCGGCATCA CCATCGAACC CTTCAGCCGC ATCTCCCAAG GCGATTCCGC CAACGTCTCC 
CGCATCAGCA TGGGAAGCCA CAGCGGCACC CATCTCGACG CGCCGTTCCA TTTCGACGAC 
GCCGGAACCA CGGTCGACGA GATCGCACTG GAAACCGTGA TCGGCAAGGC GCTGGTGCTG 
GAGATCCTCG GCACCAAGGA AATCGGGCGT CAGGAACTGG AGAAGTTTCG CATCGAGGGG 
GAAGAGCGGC TGCTGCTGAA GACGGACAAC TCGAAGCTCT GGCAGCAAAA GGGATTTTCC 
GAAGAGTACG CCGCCCTCAC CAAAGACGGC GCGCAGTACC TGCGGGACGC AGGGGTGAGG 
CTCGTAGGGA TAGACTATCT CTCCATCGAA GGGTTCCATG GCGAGGGGGA CGTACACCGC 
ACCTTGCTGG AAGACGGCAT ACTGGTAATC GAGGGGTTGA ACCTGGAAGG CATCAAGGCG 
GGGCACTACC AGCTCATCTG TCTGCCGCTG AAGCTTAAAG GCGGGGACGG AGCGCCCGTG 
CGGGCGCTCC TGATTGGCGG TTCCGATTCC GCTACCGAGC CGGAGTTCGA TCCCCACACC 
AGCAAATGGC CGCTGGCGTG A 

 

Protein sequence

MRIHDITVSL SSDLPIYPGD PGITIEPFSR ISQGDSANVS RISMGSHSGT HLDAPFHFDD 
AGTTVDEIAL ETVIGKALVL EILGTKEIGR QELEKFRIEG EERLLLKTDN SKLWQQKGFS 
EEYAALTKDG AQYLRDAGVR LVGIDYLSIE GFHGEGDVHR TLLEDGILVI EGLNLEGIKA 
GHYQLICLPL KLKGGDGAPV RALLIGGSDS ATEPEFDPHT SKWPLA