Gene Gbem_3526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3526 
Symbol 
ID6780389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4039525 
End bp4040088 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content62% 
IMG OID642769521 
ProductNUDIX hydrolase 
Protein accessionYP_002140315 
Protein GI197119888 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGGAGA GGCTCAAGGC CTCCCTTGCC TCGCGCTCGC GCGTTCCCAT GGAGGCGGGG 
CCCGTCCCCG CCGCCGTACT CCTGCCGCTC TTTCTGAAAA ACGGCGAGTA CCACCTCCTC
TTCACCAAAA GAACCCCCCA TCTCACCCAC CATAGCGGCG AGATCTCCTT CCCCGGCGGC
GTCTGCGATC CAGGCGACCT CGACAGCGCC GACACCGCAC GCCGCGAGGC GTGGGAGGAA
GTCGGCATCG CCCCCTCTGA TGTCGAGATC CTGGGCGAGC TCGACGACTG CCACTCCATA
CACAACTACC TGGTGACGCC CGTAGTCGGC GTCTTCCCCG CTAACTACAC ACTCACCGTC
AACGACGCCG AGATAGAGCG CCTCATCGAG GTGCCGCTTT CCCATTTCGA GAAGCCCGAG
TTTTTCCGGA TGGAGTACTG GGACTACAAG GGGAGGAAGG ACTTCCCCAT GTACTTCTAC
CGCTACGGAG ATGACGAGAT CTGGGGGCTT ACGGCGCGGA TACTGAAGAA CTTCCTGGAC
GTGCTCTGTG GGGTGGAGGA CTAA
 
Protein sequence
MKERLKASLA SRSRVPMEAG PVPAAVLLPL FLKNGEYHLL FTKRTPHLTH HSGEISFPGG 
VCDPGDLDSA DTARREAWEE VGIAPSDVEI LGELDDCHSI HNYLVTPVVG VFPANYTLTV
NDAEIERLIE VPLSHFEKPE FFRMEYWDYK GRKDFPMYFY RYGDDEIWGL TARILKNFLD
VLCGVED