Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3371 |
Symbol | |
ID | 6780229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3873329 |
End bp | 3876016 |
Gene Length | 2688 bp |
Protein Length | 895 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642769362 |
Product | hypothetical protein |
Protein accession | YP_002140162 |
Protein GI | 197119735 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.94917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGGCA CGCTATGGAA AAAGTTTTCA ACTTTCTTGA TTGCCTCAAC TGCTGCAGCC GCACTGTTTC TGGGCGGCTG CGAAGGGGAC AAGGGTGATC GGGGTGAACC TGGCAAGAAC GCCACCTCAT TCACCAATAT AAGCTCCCTT ACCCCGCAAC AGCAGGCAAA TCTCACCTTC GACCAGACCA ACAGCACGGT TACCAGCGTC TCCATCAGCA GTCCGCCGGT CGTCAAGTTC AAGATCCTCG ACAGCAACGG CAACCCCGTG ATCGGCATCG GCGCCAGGAA CTCGACTGGG CAGCTGCAAA ACCTCGGCTT CACCCTCGCG AAACTCGTTC CCGGCACCAA CGGCAGCCCG TCTCACTGGG TGAACTACTT AGTGACCACC GTTCCTGCCC CGGGCTCCAG CACACCGGCT GCAGCCAGGC CACCCGAGCG CGACCGTGAG GGGACCTTGA TAGACAACGG CGATGGCACC TACCAGTACA CCTTCGCCCG CGACATCACC CAGATCCAGA CCCAGGTGAA CGCCATGACC TTCACCGGCA ACAACCGCAG AAGCGACCTG GGCGATTTGA CCTATCAGCC GAGCCTTACC CACCGCCTGG TGATCCAGTA CGGCGGGACC ATCCTGAACA CCTCCCCGTC GATTCCCTTC AAAAATGCAC TCAACATCGT CTACGATTTC ATCCCGGCTA CCGGCCAAGT GGTGACCTCC TCGACCTCTA ACGCACAGGA GCGCAACATC GTGTTCACCA AGTATTGCAA CGAGTGTCAC GGAAGCCCAG GCGATCCCAA TAACCTCAAC GACCTGGGCT TCGGCTTGGG CATCACCACG CCTCATTCCG GCCGCGTCGA CACCCGCTAC TGCGCGATCT GCCATACGAG CCAGCGTGCC TACGGACACG CCATCTCCGT GGCCACCAAC GGCGCCTTCA CCGACGGCAC TTTCGTCACG GCCGAAACCA CCACCGCGGA CGTGAATACC GACGACGTGC AGGTGTTGGG CGAGTTCGTG ACCATGGTGC ACAAGATCCA CATGGGGAAC AGACTGACCG AAACCGGCTA CAACTACGCC GGTGTCACGT TCAACACCAT TGCCTACAGC CAGGATCCCG CCCTTTGCCG CAAGTGCCAC AGGGGCGACA CGCCGCAGCA ACTGGCGGTC ACGCCGCAGG GTAACAACTG GAACACCATG CCCAGCCGCA AGGCCTGCGG CTCCTGCCAC GACAACGTCC ACTTCTCGAC CGGCCTAAAC CACGACGGCA ATCTGCCACA GGCGAACGAC ACGGCCTGCA CCGGCTGCCA TACCCCGACG GCTATCCAGA CTTCGCACGC AAGGGCGCTC GCCAGCCCAC TCAACCCGCA GCCGATCGCA GGGCTGACCA ACTTCGAATA CCAGCTGCAG AGCGCGACCA TCAACGGGAC CAGCAACGAC TTGACCATCG TCTTCCGCAT CCTTGGCAAT GGCACCCCCA TCACGCTGGC CACAGCCGCG CCCGGCCTCA CCGCGCCGCT TGCCGGCTTC ACCGGCAGCC CGTCCTTCCT GCTGGCCTAC GCAAGCCCTC AGTTGGAGAC CGGCACAGCA GTTCCGGCCG ATTACAACAA CCTCGGCAAA GCGGAGGCGC AACCTGCCTT GGTATCCATC GCCGCGCTGC TCAATACGAC GACTAACGCA GCTGTTGGCA GCATCGCTGG CCCGGACAGC AACGGCTTCT ACACGGCGAC CATCAAATCA GCGGCAGCCT TCCCGGTAGG GGCGAGTATG CGCGCAGTCG GGATGCAGAG CTACTTCACC CAGACCGGTT TTGACGCCTC GATCGCCGGC CGCCACACCA AGGCGGTCAT CATACCTGTC ACGGGCGACA CAGCGCGCCG CACGGTAGTC GATCCCGACA AGTGCGCCAG GTGCCACGAG TTCTTCGAAG CCCACGGCGG GCAGCGGGTG TACCAGACCC AGCTCTGCGT AACCTGCCAT AACCCCAACC TGAGCACCAG CGGCCGTGCC ATCTCCGACG CCAAGCTCGC CGGCTTTGCC TTCACGCCGA TCCAGCTCGG CATCCTTACC ACCTGGGACC CGGCCTTCAA CAAGGCCACC CCTGGATACG CCCTCAGCTT CGCTGAGTTC TCCAACAACT TCAAGGACTT GATCCACGGC ATCCATGCCG GGAGCGCGGC AGAGGGCGGT ATCCGCACCA ACCCCATCCG CGACGTACGT AACGGCCCGG GCACCAACAT CACCCTCATC GCCGGCGAAG AGATCACCTT CCCGAATCTG CTCTCCAACT GCGACGCCTG CCACCTGAGC GCCCCCGCCG GCACCAACCG CCAGACCTAC AAGGCGAACC TGCCGCCCAA CGTGCTGCCG TCGACCCAGG TGACTAGGAA CGCCGCCGTC GTGGCCGGCG CGACCACCGC CAACATCACC GCGGCACGCA CCACGGTCCC CAACCCCGAG GACCTGGTGG TGGCCCCCAT CACCGCCTCC TGCGTCAGCT GCCACGACAG CGCACTGGCC AAGGCGCACA TGCAGGCCAA CGGCGCGCAG CTTGGCGCCG CCCTGGCAGG GCCGTCCTAC ACCAACATGG GCGTCCCGCG CTCGACCCTG CCGTCCGCAA CCGAGCAATG CGCGCTCTGC CACGGCGAAG GGCGGGTAGC CGACGTCGTA GTGGTTCACC AGAGGTAA
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Protein sequence | MQGTLWKKFS TFLIASTAAA ALFLGGCEGD KGDRGEPGKN ATSFTNISSL TPQQQANLTF DQTNSTVTSV SISSPPVVKF KILDSNGNPV IGIGARNSTG QLQNLGFTLA KLVPGTNGSP SHWVNYLVTT VPAPGSSTPA AARPPERDRE GTLIDNGDGT YQYTFARDIT QIQTQVNAMT FTGNNRRSDL GDLTYQPSLT HRLVIQYGGT ILNTSPSIPF KNALNIVYDF IPATGQVVTS STSNAQERNI VFTKYCNECH GSPGDPNNLN DLGFGLGITT PHSGRVDTRY CAICHTSQRA YGHAISVATN GAFTDGTFVT AETTTADVNT DDVQVLGEFV TMVHKIHMGN RLTETGYNYA GVTFNTIAYS QDPALCRKCH RGDTPQQLAV TPQGNNWNTM PSRKACGSCH DNVHFSTGLN HDGNLPQAND TACTGCHTPT AIQTSHARAL ASPLNPQPIA GLTNFEYQLQ SATINGTSND LTIVFRILGN GTPITLATAA PGLTAPLAGF TGSPSFLLAY ASPQLETGTA VPADYNNLGK AEAQPALVSI AALLNTTTNA AVGSIAGPDS NGFYTATIKS AAAFPVGASM RAVGMQSYFT QTGFDASIAG RHTKAVIIPV TGDTARRTVV DPDKCARCHE FFEAHGGQRV YQTQLCVTCH NPNLSTSGRA ISDAKLAGFA FTPIQLGILT TWDPAFNKAT PGYALSFAEF SNNFKDLIHG IHAGSAAEGG IRTNPIRDVR NGPGTNITLI AGEEITFPNL LSNCDACHLS APAGTNRQTY KANLPPNVLP STQVTRNAAV VAGATTANIT AARTTVPNPE DLVVAPITAS CVSCHDSALA KAHMQANGAQ LGAALAGPSY TNMGVPRSTL PSATEQCALC HGEGRVADVV VVHQR
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