| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3359 |
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| Symbol | |
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| ID | 6780217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3858600 |
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| End bp | 3861251 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642769350 |
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| Product | hopanoid biosynthesis associated RND transporter like protein HpnN |
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| Protein accession | YP_002140150 |
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| Protein GI | 197119723 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000128558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAA CGGCAAAAAG AGGCAGCCTC CTCTTCTCCC TTTCCTCCCG CCGTCCCTGG
CTGGTACTGG TTATAGCGTT GCTGCTGTCG GTGCTTTCCT TGTGGCTCAC CTACCAGCGC
ATGGAATTCC TGACCGGCAG GGACGACCTG ATGCCGCAGA ACACCGCCTT CAATCGCGAC
TTCCGGGAAT TCCGCGCCGA CTTCGGCGAC ATGGAGGAAA TAGCGGTCGT CATTGAGGGG
AACGACCCCG AGCGGGTGGG CGCCTTCGGC AACCGGCTCT ACGACACGCT CTCCAAGGAG
CCCAGGTACT TCTCCGACGT CTTCTACCCG TACGCACTCC CCTTCTTCCA GAAAAACGGC
CTGCTCTTCA TGCCGCTTGA GGACATAAAG GAGCTGCGCA AAAACCTCTC TCTTGCTGCG
CCGGCCTTGA AGGCACTCGC CGCATCCCCG TCGGTGCAGA CGCTCTTCAC CCACCTGACC
CGGAGCATGG AGCGCTGTGC CGCAGGGGAC GAGTCGCAGC TTCCGAGCGT ACTGTTCATG
CTGGACAAGC TCGGCGCAGG CTTCCAAAGC TTCGGCGGCG GCAAAGGCGC GCCCCCCTCC
ATGGAAACCG TCTTCATGAA TCCGGACTCC TCCTTCGCCA AGGCGGGGAG GCAGCAGATC
CTTACGGTGC TCCCGGTGAG GGATATGCAG GGATTCGTCC CGGCGGCGGG GGCGATACAA
AAAGTGCGCG CCGAGGTGGC CAGGCTGAAG GCGCTTCCCG AATTCAAGGG GGTGACCGTC
GGGCTCACCG GAACGCCGGT GCTGGAAAAC GAGGAGATGG CGACGAGCCA AAACGACATC
GCGCTCGCCA CCGCGGTCTC CCTGGTGCTG ACCGTGATCC TGTTGCTTTT GGCCTTTCGC
GGCGTGCTCA ACGTGCTGGC CGCAATGGCA TCCCTGCTGG TGGCCATCTC GCTTTCCTTC
GGCTTCGCCA CGCTTGCCGT CGGCCATCTC AACATACTTT CCATGGTCTT CGCCGTGATG
CTTATCGGCA TCGGCATCGA GTACGGGATT CAGGTCGTGC TCCGTTACCA GGAGGAGTTG
AACCTGGGGG CGGGGGAACT GCCGGCGATT AAGACCGGAC TGGAAAGAAA CGTCTGGGCC
ATCATCATGG CCGCGGCGAC GGTGGCGGCC GCCTTCCTCA CCTTCGTCCT CACCGACTTC
AAGGGGATAG CGGAACTCGG CATCATCGCC GCGGGCGGGG TCGCCATCTG CGTTCTGGTC
ACCTTCACCG TCCTTCCCGC CATGCTGGTG CTCCTCTCCC GGCACAGAAA GCCGCACGCG
CGGCAAGGGG TGACGCACTT CTCGGAGCAC GGCGTCGTTG CGAGGATCGT CTATGGCCGC
CCCAAGCTCG TCATCGCGGT CACCGCTTTT TGCTGCCTGG CATCCCTCTA CCCCCTTTCC
CGGATCGCCT TCGATTACAA CCTGATGAAC CTGCAGGCCG AGGGGCTTGA GTCGGTGACT
TACGCCTACA AGCTGATGAA GAGCAAGGAA AACAGCGGCT ATTTTGCCGT GGTCACCGCG
AAGAACGAGG CGGAGGCGCG GGAGAAGAGC GCGCGGCTGG AAGCGCTGCC GACGGTGGAT
CACGTGGTGA GCCTGCATAC CCTGGTGCCG GACCGCCAGC GGGAAAAGCT CGCCGAGCTG
GCGGCCATAA GGAGCGAGCT TGCCGACGTC AAACCGGCCC CATACGAGGA AGAGCTCTCG
CTCATGGAAC TGCCGACCGT TTTCGAGAAT TTCAGGAACG CGGCGGTAGC GCTCAAGGGG
AAGCTGGAAA AGGAGCGCCG TCCCGAGGCG AAGCAGGTCT CCTCCTTCGT GGCCATACTG
GACAAGTTCT TCGCGGGGCT GGAAAAGGAG CGGGACAAAA ACGCCGTCGG CATGCTGCAG
GAGTTCCAGG GGGGGATGTT CCGCGAGCTG CCGCAGAAGA TAGAGGCATT GAAGCAGAGT
CTGGACGCCT CGCCGGTCAC CGAGGCCGAC ATCCCGGCGG AGCTCCGTTC GCGGTTCGTG
GGGAAGAGCG GCAGGCTCTT GCTGCAGGTA GCGCCCAAGT GGGAAATCTT CAACCGCGAG
CCGCTCGAAG CCTTCCTGAA CCAGGTGAAG AGCGTCGATC CGCATGCGAC CGGGCAGCCG
GTGATGGTGT ACGAGTCCAT GACCATCATG CGCGACGCCT ACCGGCTCGC CTTCATTTAC
GCCTTTGCCG CCATCGTAGT GATCCTGCTG GTCGCCTTCA GGAGCGTCAA GTTCGCCGCC
ATAGGTCTCA TCCCGCTGAT CGTCGGCGTC TTGTTCATGG TGAGCGGCAT GTGGCTTTTC
GGGATCGACT TCAACTCCGC CAACATCATA GTCATGCCCT TGGTGCTGGG GATCGCCGTC
GACTCGGGGA TCTACATCAT CAACCGCTTC CGGCGCGAAG ACGGGAGTGC CGCGGCGGTC
GTTCTGAGCA GCACCGGGGT CGGGGTTCTG CTCAACACCC TCACCATCAT GGCCAGCTTC
GGCGCGCTCA TGGTGGCGCA TCATCAGGGG GTTTTCAGCA TCGGCGCCGT CATGTCGCTG
GGGATGGTCG CCTGCCAGCT GGCCTTTATG GTCACCTTAC CGGCGGTGCT GACCCTAGCC
GGTAAAAGAT GA
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| Protein sequence | MKETAKRGSL LFSLSSRRPW LVLVIALLLS VLSLWLTYQR MEFLTGRDDL MPQNTAFNRD
FREFRADFGD MEEIAVVIEG NDPERVGAFG NRLYDTLSKE PRYFSDVFYP YALPFFQKNG
LLFMPLEDIK ELRKNLSLAA PALKALAASP SVQTLFTHLT RSMERCAAGD ESQLPSVLFM
LDKLGAGFQS FGGGKGAPPS METVFMNPDS SFAKAGRQQI LTVLPVRDMQ GFVPAAGAIQ
KVRAEVARLK ALPEFKGVTV GLTGTPVLEN EEMATSQNDI ALATAVSLVL TVILLLLAFR
GVLNVLAAMA SLLVAISLSF GFATLAVGHL NILSMVFAVM LIGIGIEYGI QVVLRYQEEL
NLGAGELPAI KTGLERNVWA IIMAAATVAA AFLTFVLTDF KGIAELGIIA AGGVAICVLV
TFTVLPAMLV LLSRHRKPHA RQGVTHFSEH GVVARIVYGR PKLVIAVTAF CCLASLYPLS
RIAFDYNLMN LQAEGLESVT YAYKLMKSKE NSGYFAVVTA KNEAEAREKS ARLEALPTVD
HVVSLHTLVP DRQREKLAEL AAIRSELADV KPAPYEEELS LMELPTVFEN FRNAAVALKG
KLEKERRPEA KQVSSFVAIL DKFFAGLEKE RDKNAVGMLQ EFQGGMFREL PQKIEALKQS
LDASPVTEAD IPAELRSRFV GKSGRLLLQV APKWEIFNRE PLEAFLNQVK SVDPHATGQP
VMVYESMTIM RDAYRLAFIY AFAAIVVILL VAFRSVKFAA IGLIPLIVGV LFMVSGMWLF
GIDFNSANII VMPLVLGIAV DSGIYIINRF RREDGSAAAV VLSSTGVGVL LNTLTIMASF
GALMVAHHQG VFSIGAVMSL GMVACQLAFM VTLPAVLTLA GKR
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