| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3350 |
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| Symbol | trpA |
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| ID | 6780208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3848588 |
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| End bp | 3849391 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642769341 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_002140141 |
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| Protein GI | 197119714 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.282051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAGGA TTTCAGATAG ATTTGCCAGC CTGAAAGAAC GTGGGGAAAA GGCGCTGGTC
ACCTTCGTCA CCGCCGGCGA CCCGGATCTG GCGACTACGG AAAAGGTGGT GCTCGAACTC
GAACGGGCAG GGGCCGACCT GATCGAGCTG GGAGTTCCCT TCTCCGATCC CATGGCTGAC
GGCCCGACCA TCCAGCTCTC CTCGGACCGG GCCCTGGCCT CCGGCACCAC TCTCCCGGCA
ATACTGGAGC TGGTATCGAG GCTCAGGGAA AAGACCCAGG TCCCCATCGT GCTGATGGGT
TACTTCAACC CCATCTTCGC CTACGGTTCC GAGCGCTTTG CCTTCGACGC GGCACAAGCC
GGCGTCGACG CCCTGCTGGT GGTGGATCTC CCCCCCGAGG AGGCTGCGGA GCTAAAAGGA
GCTACCGACA GCTGCGGACT CGACCTCATC TTCCTCCTCA CCCCGACCTC AGACGGCTCC
CGGATCGCTT CTGTCGCGCG CCAGGGAAGC GGCTTCATCT ACTACGTCTC CGTCACCGGC
GTCACCGGCG CGCGTAGCGC GGTCGCCGAT GACCTGGCGG CCCGGGTCAC CGAGGTGCGC
GGCGCGCTGG AACTGCCGCT TGTGGTCGGC TTCGGCATCT CCACCCCGGA GCAGGCGGGG
GAGGTGGCCC GGGCGGCCGA CGGCGTGGTG GTGGGAAGCG CGCTGGTGAA GTACTTCGAG
AAGTACCAGG GGGCCGAACT CCTGGAACAG CTGGGGGGAT TCGTCTCGGC GCTAAAACAA
GGAGTGCTGA AGGGCTCCCG GTAA
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| Protein sequence | MSRISDRFAS LKERGEKALV TFVTAGDPDL ATTEKVVLEL ERAGADLIEL GVPFSDPMAD
GPTIQLSSDR ALASGTTLPA ILELVSRLRE KTQVPIVLMG YFNPIFAYGS ERFAFDAAQA
GVDALLVVDL PPEEAAELKG ATDSCGLDLI FLLTPTSDGS RIASVARQGS GFIYYVSVTG
VTGARSAVAD DLAARVTEVR GALELPLVVG FGISTPEQAG EVARAADGVV VGSALVKYFE
KYQGAELLEQ LGGFVSALKQ GVLKGSR
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