Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3345 |
Symbol | |
ID | 6780203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3841908 |
End bp | 3842744 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642769336 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_002140136 |
Protein GI | 197119709 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATATTAG TGGTGGGGAG CAAAGGGATG CTGGGGCAGG AACTGATGCA GGTGTTCGGC GACGCCGCCC GCGGGGTGGA CCTCGACGAC ATCGACATCA CCGACCTCGC TTCGGTGCAG CGGGTCCTTT TGACCCTCAA ACCCCGCATC GTCATCAACG CCGCAGCCTA CACCGACGTG GACGGCTGCC AGGCAGAGGT GGAAAAGGCG ATGCAGGTCA ACGGCGAAGG GGTCGCCTAC CTGGCCCTGA CCACCAAGGA GATCGGCGCC AAGCTGGTGC AGGTCAGCAC CGACTACATC TTCGACGGCA AGAAGGGGTC GCCCTACGTA GAGGACGACC TGGCGTCTCC GCTTTCCATC TACGGCGAGT CGAAGCTGGC CGGCGAGATG AACGCCTGGT TCAACCCCGA CCACCTGATC GTCCGGACCC AGTGGCTTTA CGGCCACGGC GGCAAGAACT TCGTCGAGAC GATGCTGAAG CTGGCGGGGG AGAGGAGCGA ACTCTCCGTG GTGGACGACC AGACCGGCTC CCCCACCTGG GCCTACGATC TCGCCCTGGC CATCAAGGCG CTCTTGGACA AGGGGTGCGG TGGCACCTAC CATGCCGCGA ACGCCGGTTT CGTCTCTTGG AACGGTTTCG CTAAGGAGAT CTTCCGCCTG GCGGGGATTG CCGACATCAA GGTCAATCCG ATGAGCACGG CGGAGCTGAA CCGCCCGGCG CCGCGCCCGC TCTACTCGAC GCTCGATTGC AGCAAGCTCG CCCAGGATAC CGGGTTCGCG CTGCAGCCCT GGCAGCAGGC CCTGGAGCGG TACCTGGAAC TGCGGCCGGC ACGATAG
|
Protein sequence | MILVVGSKGM LGQELMQVFG DAARGVDLDD IDITDLASVQ RVLLTLKPRI VINAAAYTDV DGCQAEVEKA MQVNGEGVAY LALTTKEIGA KLVQVSTDYI FDGKKGSPYV EDDLASPLSI YGESKLAGEM NAWFNPDHLI VRTQWLYGHG GKNFVETMLK LAGERSELSV VDDQTGSPTW AYDLALAIKA LLDKGCGGTY HAANAGFVSW NGFAKEIFRL AGIADIKVNP MSTAELNRPA PRPLYSTLDC SKLAQDTGFA LQPWQQALER YLELRPAR
|
| |