| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3270 |
|---|
| Symbol | |
|---|
| ID | 6780128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3762461 |
|---|
| End bp | 3762880 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642769263 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_002140063 |
|---|
| Protein GI | 197119636 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00586] mutator mutT protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.196596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCATA CGGAAAAGCA GAGAAGGCAT GTGCACGTCG CCTGCGCCAT CGTAGAGCGG
GACGGGCTGG TGCTGTCGGC GCTCAGGAGC GCCTCGATGA ACCTGCCTCT CAAGTGGGAA
TTTCCGGGGG GGAAGATCGA GCCCGGCGAG GGGCGCGAGG AGTGCTTGAA GCGCGAGATG
GTCGAGGAAA TGGGCGTGGA GGTCGAGGTG GGGCAAGCGC TGACGCCGGC CACCCACAGC
TACCCCACTT TCGACGTGAC CTTGTATCCC TACCTTTGCC GCATTGCTTC CGGCGAGATT
ACCCTTTACG AGCATTCTGA GGTGAGATGG CTCCCCCCCG CGAAGATGCT GGAACTGGAG
TGGGCCGACG CGGACCTGCC GGTAATACTG GAATACCAGC AACTGAGTAA CAGGGGCTAG
|
|---|
| Protein sequence | MSHTEKQRRH VHVACAIVER DGLVLSALRS ASMNLPLKWE FPGGKIEPGE GREECLKREM
VEEMGVEVEV GQALTPATHS YPTFDVTLYP YLCRIASGEI TLYEHSEVRW LPPAKMLELE
WADADLPVIL EYQQLSNRG
|
|---|
| |