| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3218 |
|---|
| Symbol | |
|---|
| ID | 6780076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 3706562 |
|---|
| End bp | 3707539 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642769212 |
|---|
| Product | CHAD domain containing protein |
|---|
| Protein accession | YP_002140013 |
|---|
| Protein GI | 197119586 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5607] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0448482 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCA CCATTCCAAG CACAGGCGAA CCAGATTCCA TTCGGACCTG GTTCGCCTCC
CGCACCATAC TTACCGCAGC CGCAAAACTC TTTTTCGCCA ACTGGAAGCA AGTATCGAAG
ACGCTGGAGG AGGAACAACT CCACGACCTG CGCGTCGCCT CACGCCGCCT GCGGGAGGCA
CTGGCACTCT TCGAACCCTG CTCTCCCTCG GATGCAGCGA GCAAGCTGTC AAAGCGGGTC
AGAAAGGTGA CCCGGATGCT GGGCCCGATA CGCAATGCCG ACGAGGCCCA TCTCTTTTTC
CTTGAACTAA AGCAAAGCAG GCCACAGACC GACACGGCGG TGCTGGACGA GCTTTTGCGC
GCACTTGAGC AGGAGCGCGA GCTAGCGCGC AGCCAACTCG CCGCGACCTT GCGCCACCCC
CGCGAGCGCA GGCAGACCAC CACGCTGCTG GACGCTCTGC ACGACCGGCT CAACCTCTTC
CGGGGCCAGA AGGCAAATCC CTTCCTCGAC TTCCGCACCT TCGCGGAGGG GGCGCTCACG
GAGCGCGCCG AAACTCTCGC GCTACTCCTC CCGGCGGCGG CCATTGAAGG AGATCCCGCA
GCACAGCACA GGCTGAGGAT TGCGGTGAAG AAGATGCGTT ACCGGGTGGA GCTCATGGAA
CCGCAGCTGC CATCGGCGGG TGCCTTGAGG GACAAGCTGA AGAGCCACCA GGAGGTGCTC
GGGAAACTGC ACGACCTGGA CGTTTTTACC GGGATGGTGC GGGAAAGGAT GGCCGAGGGG
TCGGCCAAGG AGAAACTGCT GGACGTAATG GAGCAGCTAA GGCATGAGCT TTTCAAACGG
TTTATGGAGC AGCTCCAGGC GATGCCATTG GCGGCGGTGC CGGAAGAGGT CAGACTTCTC
TTTCCTCGAC GCCCCCAGCC AGATCCAGCA GGCAGCCGGC AGTCGCGCGG CAGACCTTTT
CCGCGAAGGA AAGGTTGA
|
|---|
| Protein sequence | MARTIPSTGE PDSIRTWFAS RTILTAAAKL FFANWKQVSK TLEEEQLHDL RVASRRLREA
LALFEPCSPS DAASKLSKRV RKVTRMLGPI RNADEAHLFF LELKQSRPQT DTAVLDELLR
ALEQERELAR SQLAATLRHP RERRQTTTLL DALHDRLNLF RGQKANPFLD FRTFAEGALT
ERAETLALLL PAAAIEGDPA AQHRLRIAVK KMRYRVELME PQLPSAGALR DKLKSHQEVL
GKLHDLDVFT GMVRERMAEG SAKEKLLDVM EQLRHELFKR FMEQLQAMPL AAVPEEVRLL
FPRRPQPDPA GSRQSRGRPF PRRKG
|
|---|
| |