| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3176 |
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| Symbol | |
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| ID | 6780035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3662220 |
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| End bp | 3664025 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642769172 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_002139973 |
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| Protein GI | 197119546 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGGTC TGTTGCTGAC ACTGATGAAG GCCGGCCCGA TGCCCAAGAG GTTTCCTCCA
TACCTGGCTC TTATCTGCCT CGCGGCGCTG CTTCTCCTTG CGTCCGCCGC CCTCGCCGCC
GATCCGGTCG AGATCGAGGT GACAGGTGTG GAAGGCGATG CCCTGGAGAA CGCGCGGCAG
GCGCTGGCGC TTCCCTACGG CTTGGTCCGG GACGGGAAGG TGGATCGGCT CTGGCTGGAC
CGCTTCGCCA AGCAGGCGCC GGACAAGGTA CGCCAGGCGC TGCAGCCTTA CGGCTACTAC
AAGTCGGAGG TTTCTGCCCG GGTGGTTCAG ACAAGGGACG GCAAACCGAG CCTGCAGGTC
GTCGTCATCC CCGGGGAACC GGTGCGGGTC ACCGAGGTGA CGGTGGAGCT CAAGGGGGCA
GGAGCGGAGG AGAGAAGGCT CTCGCGGGTG CGGGATGCCT TCCCGGTGAA AAGGGGGGAG
GTGCTGCTGC AACCCGACTA CGAGCGGGGC AAGGGGGCGC TGCAGTCTAT GGCCCAGAAG
CTGGGGTATC TCGATGCCGC TTTCCCCCGT CACGAGATCC GCATCGCCGA GGACCGTTCC
TCCGCGCGGA TCGCCCTGGT GCTCGACACC GGCCCGCGGT TCTATTTCGG CCCGGCGGTG
ATCCAGGGTG CGCCGGAGTA CCCCGAGTCC TACCTGAAGC GTTTCGTCGC CTTCAAGGAG
GGGGAACCGT TCTCCTACGC GAAGATCGGA GAGACGCAGC TCAATTTCGC CAACTCCGAG
CGCTTCAAGC AGGTGGTGGT CACGCCGGAG CGCGAGCGGG CCGAGAACGC GCGGGTACCT
GTCGTGGTGC AGCTCACCGA GGCGCCACGC CGCACGGTAA GGCCCGGGAT CGGGTACGGG
ACCGACACCG GCGCCAGATT CTCCACCCAC TACCGCGACT TGAACCTCTT CCACAAAGGG
CACGACCTCG ACTTGAGCCT CTACGCGGCG CAGCGCCTGC AGGGGTTCGC CGGCCGCTAC
ACCATACCGA GCAGCAGCGA TTACCGAAGT TCCACCGCCT TGCAATTGAA CCTGCAAAAG
GAAGACGTCA CCAGTTACTT GAGCAAGATA GTCGCGCTGG AACTGGATCG AAACATAGGG
TTGGGGCGCG GCGAACTGGC GACGGGGTAC GTTAGGCTGC TGCAGGAAGT CTTCACCGTC
GGCAACGTGA ACGCGAACTC CAGGCTGGTG CTCCCGGGAT TCCGTTTCTC CAAGGAAACC
TTCAACGACT TGGTCCGCCC CAGGCGCGGT TACGCCTATA CCCTGGAACT GCGCGGCGCC
CACCCGTACC TGGGATCGGA CACCGGGCTC ATCCAGGGGA TCGCCCATGC CAACCTGCTG
GTTCCGCTAC CCTGGCGCCT GTCCCTGCAA ACGCGGGGGG ATGCGGCGTA CAGCCTGCTC
AATGACCCCT TCTCGGACCT CCCGCCGTCC ATCCGCTTCT TTGCCGGTGG CGACCAGAGC
GTGCGCGGCT ACACCTACCA GAGCTTAGGC CCCCGCGATT CCTCCGGGAA GGTGGTGGGG
GGGAGGCACC TGCTGGTCGG GAGCCTGGAG CTTTTGCGCG CCCTTTACAA GGACTGGGGG
GTGTCGGTCT TCTACGACAT AGGGAACGCC TTCAACAACT ACGCGGACAT GCGCCTGAAA
GACGGGACCG GCGTAGGCGT CCATTACTAC ACCGCCGTCG GGGGGCTGAA CCTCTACCTC
GCCAGGCCGC TGACTTCCGG GGCGGGGAGC TACCGCATCC ATTTCACCGT GGGGTTCCAG
CTATGA
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| Protein sequence | MPGLLLTLMK AGPMPKRFPP YLALICLAAL LLLASAALAA DPVEIEVTGV EGDALENARQ
ALALPYGLVR DGKVDRLWLD RFAKQAPDKV RQALQPYGYY KSEVSARVVQ TRDGKPSLQV
VVIPGEPVRV TEVTVELKGA GAEERRLSRV RDAFPVKRGE VLLQPDYERG KGALQSMAQK
LGYLDAAFPR HEIRIAEDRS SARIALVLDT GPRFYFGPAV IQGAPEYPES YLKRFVAFKE
GEPFSYAKIG ETQLNFANSE RFKQVVVTPE RERAENARVP VVVQLTEAPR RTVRPGIGYG
TDTGARFSTH YRDLNLFHKG HDLDLSLYAA QRLQGFAGRY TIPSSSDYRS STALQLNLQK
EDVTSYLSKI VALELDRNIG LGRGELATGY VRLLQEVFTV GNVNANSRLV LPGFRFSKET
FNDLVRPRRG YAYTLELRGA HPYLGSDTGL IQGIAHANLL VPLPWRLSLQ TRGDAAYSLL
NDPFSDLPPS IRFFAGGDQS VRGYTYQSLG PRDSSGKVVG GRHLLVGSLE LLRALYKDWG
VSVFYDIGNA FNNYADMRLK DGTGVGVHYY TAVGGLNLYL ARPLTSGAGS YRIHFTVGFQ
L
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