| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3172 |
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| Symbol | |
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| ID | 6780031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 3654137 |
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| End bp | 3654595 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642769168 |
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| Product | hypothetical protein |
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| Protein accession | YP_002139969 |
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| Protein GI | 197119542 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACTCCG GCCAGCGAGG ATTCAGCCTG ATCGAACTAC TCACAGTCGT AGCTATCATC
GGCATACTGG CGGCTATAGC TCTACCTGCG TTCTCCGACT ATGTCTACAA GGCGCGCGTC
GCCCGCTGCA AAGCAGAGAT CGTGACGCTG CAAACCTCGA TCACGGCCTA TAAAATCAGC
AACAACCACC AGCCGGATAC ACTGGCAGAG GCAGGCTACG AGAACCTTCT GGACCCTTGG
GGGCATCCTT ATCGATACCT GAACATCGCA GACGGCTCGG TAAAAGGTAA AGGGAGTTTC
CGAAAGGACC GCTTCCTCAA TCCCCTCAAC TCGGATTTCG ACCTCTACAG CATGGGTGCG
GACGGCTTGA GCCGCACCCC GCTAAGCGCC GCGGAAAGCC ATGACGACGT CATTCGTGCC
AGCAATGGCG GGTTTATCGG CCTGGCATCG GATTTCTAG
|
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| Protein sequence | MHSGQRGFSL IELLTVVAII GILAAIALPA FSDYVYKARV ARCKAEIVTL QTSITAYKIS
NNHQPDTLAE AGYENLLDPW GHPYRYLNIA DGSVKGKGSF RKDRFLNPLN SDFDLYSMGA
DGLSRTPLSA AESHDDVIRA SNGGFIGLAS DF
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