Gene Gbem_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3164 
Symbol 
ID6780023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand+ 
Start bp3647060 
End bp3647557 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content63% 
IMG OID642769160 
Productnucleoside 2-deoxyribosyltransferase 
Protein accessionYP_002139961 
Protein GI197119534 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG3613] Nucleoside 2-deoxyribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAA ATTCGCCCGG CTTCAGGGCC GGAAAACAGA TGAAAGTATA TCTGGCCTCG 
CCTCTAGGCT TCAGCCCGGA GAACGACCAT TACCGCGGCA AGGTGAAAGA GCGCCTGAAC 
CAGTTGCATT GCACCGTCTT CGACCCCTGG GACCAAGAGG AGGTCGGGCG GCGCATAGAG 
GACGCGCTTG GCACAGCTTT CGGCCCGGAG CGCGCCGGCG CCATCGAGGA GGCAGCACGA 
TGCGCCGGCC GGGTCAATGC AGAGGGGATA CGCGCGGCGG ACGTGGTCCT CGCCGTCTTG 
GACGGAACCG AGCCCGACAG CGGGACCGTG GCGGAAGTGG GATTCGGAGC GGGGATAGGC 
AAAAGATGCT TCGGGCTGCG GACCGACATC CGCGATTGCG GCGACCTGCC AGGCCTCCCC 
CTCAACCTGC AGTTGCTCCA TTTCATCGAG TACAGCGGCG GCAGGCTTTT CAGGAGCATC 
GAGGCAATAG AGTTTTAG
 
Protein sequence
MTENSPGFRA GKQMKVYLAS PLGFSPENDH YRGKVKERLN QLHCTVFDPW DQEEVGRRIE 
DALGTAFGPE RAGAIEEAAR CAGRVNAEGI RAADVVLAVL DGTEPDSGTV AEVGFGAGIG 
KRCFGLRTDI RDCGDLPGLP LNLQLLHFIE YSGGRLFRSI EAIEF