| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3137 |
|---|
| Symbol | |
|---|
| ID | 6779996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3621625 |
|---|
| End bp | 3622965 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642769134 |
|---|
| Product | putative hydrogenase 2 b cytochrome subunit |
|---|
| Protein accession | YP_002139935 |
|---|
| Protein GI | 197119508 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG5557] Polysulphide reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAATC CTGAAGAATA CCAAAAGCTG GAAGGTAAGA TCTTTACCAA GTCATTCTTC
ATCCTCCTGT CGGTGGTGCT GCTCGGCTTC TACTTCGTGG GGGTGCGCTA CGTGAAGGGT
ATCGGCGCGG TCTCCAACAT GAGCGACGGC TACCCCTGGG GGATCTGGAT CACCTACGAC
GTCGCCACCG GAACCGCCAT CGCCTGCGGC GGCTACGCGG TCGCCATCCT GGTCTACATC
CGGAACCGGA TGCAGTACCA CCCGATGATC CGCTCGGCGA TCCTCACCTC CATGTTCGGC
TACGGCCTGG CCGGCTTCTC GGTCATGGTC GACTTGGGTC GCCCCTGGAA CGCCTACAAC
TTCTTCATCC CGAGCAAGTG GCAGGCGAAC TCCGCCATGT TCGAGGTCGC CCTTTGCGTC
ATGGCCTATT CCACGGTTCT CATCCTCGAG TTCCTCCCGG CCATCCTGAC CTCCATCGAG
CAGAGCAAGT GGGATCGGAT GAACGCGGTC AGGAACTGGC TGCACCCGAA AATAGCCCCG
GACCAAAAGA GCATGCAGGA CAAGCTGGAG ATGGTACGCC TGGGGGCCGT GTGGCTCAAG
CCGCGCCTGA ACAAGGTCCT CATCTTCTTC ATCGTCCTCG GCATTACGCT TCCGACCATG
CATCAGTCGT CATTGGGGAG CCTGCTCCTC ATCGCCTCGA CCAAGCTGCA CCCGCTCTGG
CACACCGGCT TCCTGCCGCT GTTGTTCCTC TTGAACTGCG TCTTCATCGG CTACGCCATA
GCGATCCTGG AGTCCATCAT CTCCAGCTAC TCCTTCAAGA GGCCCTTCGA GACCGAGGAG
CTTTCCGGCC TCGCCGCGCT GATTCCGTTC GTCACCGTGA TCTGGCTCTG CGTCGTGATC
GGGGACCTGG CGTACCGCGG CCAGATTGGC GCCGCCCTCA AGGGGGATTT CTACTCCGGC
TGGTTCCTGA CCGAGTTCCT GCTGGTGGCG AGCGGCTCCC TGCTCCTTTT CTTCAAGAAA
TTCAGGAGAT CGCCGCGCTG GCTCTTCACC AGCGCCTCGC TGATCGTCTT AGGCGGCGCC
CTTTACCGTT TCAACGTCTA CCTGATCGGC TTCAACCCGG GGCAGGGGTG GAGGTACTTC
CCCTCCTTCG CCGAGGTGAT GGTCACCGTC GGCATCGTGG CGCTGGAGGT GCTGGGGTAC
AAGGTGTTCG TAGCCCTCTT CCCCGTGCTT CCCAACACTT CGGCTCATGG TGGCGGGCAT
GCCCCCGCGA AAAAGACGGC GGCCAAGCAT GGCAAGAAAG CTGCGCTGGA CGTCCCGCAC
GCGCCGGTCG AGGCGCACTG A
|
|---|
| Protein sequence | MGNPEEYQKL EGKIFTKSFF ILLSVVLLGF YFVGVRYVKG IGAVSNMSDG YPWGIWITYD
VATGTAIACG GYAVAILVYI RNRMQYHPMI RSAILTSMFG YGLAGFSVMV DLGRPWNAYN
FFIPSKWQAN SAMFEVALCV MAYSTVLILE FLPAILTSIE QSKWDRMNAV RNWLHPKIAP
DQKSMQDKLE MVRLGAVWLK PRLNKVLIFF IVLGITLPTM HQSSLGSLLL IASTKLHPLW
HTGFLPLLFL LNCVFIGYAI AILESIISSY SFKRPFETEE LSGLAALIPF VTVIWLCVVI
GDLAYRGQIG AALKGDFYSG WFLTEFLLVA SGSLLLFFKK FRRSPRWLFT SASLIVLGGA
LYRFNVYLIG FNPGQGWRYF PSFAEVMVTV GIVALEVLGY KVFVALFPVL PNTSAHGGGH
APAKKTAAKH GKKAALDVPH APVEAH
|
|---|
| |